RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 AASDHQ4L235 1098 aaPredicted RBP11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 ANKRD20A8PQ5CZ79 823 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 ATXN7L2Q5T6C5 722 aaPredicted RBP11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 NEK5Q6P3R8 708 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 TRIM69Q86WT6 500 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 VSIG1Q86XK7 387 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 PQLC3Q8N755 202 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 OR6K2Q8NGY2 324 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 ZNF670Q9BS34 389 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 NUSAP1Q9BXS6 441 aaKnown RBP11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 CPEB1Q9BZB8 566 aaKnown RBP11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 PREBQ9HCU5 417 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 FSCN3Q9NQT6 498 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 UBA2Q9UBT2 640 aaPredicted RBP11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 SALL4Q9UJQ4 1053 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 ALG6Q9Y672 507 aa11.93□□□□□ -0.5
HMGXB3-203ENST00000510472 TBC1D3DA0A087WVF3 549 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 TBC1D3IA0A087WXS9 549 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 TBC1D3EA0A087X179 549 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 TBC1D3KA0A087X1G2 549 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 TBC1D3FA6NER0 549 aaPredicted RBP11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 FAM47DPA6NHR8 397 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 TBC1D3LB9A6J9 549 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 WNT9AO14904 365 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 MUSKO15146 869 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 AP1G1O43747 822 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 BUB1BO60566 1050 aaPredicted RBP11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 GJB3O75712 270 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 FSBPO95073 299 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 CFIP05156 583 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 TBC1D3HP0C7X1 549 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 COMTP21964 271 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 KDELR1P24390 212 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 SSR1P43307 286 aaKnown RBP11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 RHOAP61586 193 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 NSUN2Q08J23 767 aaKnown RBP eCLIP11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 CCDC15Q0P6D6 951 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 KRT81Q14533 505 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 RFTN1Q14699 578 aaPredicted RBP11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 SPA17Q15506 151 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 ZNF805Q5CZA5 627 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 NCBP2-AS2Q69YL0 99 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 TBC1D3GQ6DHY5 549 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 TBC1D3CQ6IPX1 549 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 ZNF354CQ86Y25 554 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 LRRC49Q8IUZ0 686 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 MAP7D3Q8IWC1 876 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 TBC1D3Q8IZP1 549 aaPredicted RBP11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 ZCCHC9Q8N567 271 aaKnown RBP11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 KCTD6Q8NC69 237 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 TSEN2Q8NCE0 465 aaKnown RBP11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 GRIN3AQ8TCU5 1115 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 NSMCE3Q96MG7 304 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 GDAP1L1Q96MZ0 367 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 ZNF599Q96NL3 588 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 PSKH2Q96QS6 385 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 BAG1Q99933 345 aaPredicted RBP11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 RTKNQ9BST9 563 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 EDEM2Q9BV94 578 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 TM9SF3Q9HD45 589 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 DKK3Q9UBP4 350 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 CDV3Q9UKY7 258 aaKnown RBP11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 FADS3Q9Y5Q0 445 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 SPTBN4Q9H254 2564 aa11.92□□□□□ -0.5
HMGXB3-203ENST00000510472 A0A1W2PR77 199 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 C16orf96A6NNT2 1141 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 C4orf47A7E2U8 309 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 TMEM110-MUSTN1A8MSY1 372 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 BTNL10A8MVZ5 291 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 DFFAO00273 331 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 KRIT1O00522 736 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 AREL1O15033 823 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 INSIG1O15503 277 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 SPINT1O43278 529 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 PALMO75781 387 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 ADRB3P13945 408 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 RGRP47804 291 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 CSNK1EP49674 416 aaKnown RBP11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 NEK3P51956 506 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 RACK1P63244 317 aaKnown RBP11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 SLC10A7Q0GE19 358 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 GALNT2Q10471 571 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 SLC10A2Q12908 348 aaPredicted RBP11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 TAZQ16635 292 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 GDPD4Q6W3E5 623 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 PARS2Q7L3T8 475 aaKnown RBP11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 HCAR2Q8TDS4 363 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 FATE1Q969F0 183 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 PPP1R16AQ96I34 528 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 TSGA13Q96PP4 275 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 RNF157Q96PX1 679 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 OSBPL1AQ9BXW6 950 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 ZDHHC5Q9C0B5 715 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 LACRTQ9GZZ8 138 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 MIR1-1HGQ9H1L0 117 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 ZDHHC6Q9H6R6 413 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 KLHL11Q9NVR0 708 aa11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 DNAAF2Q9NVR5 837 aaKnown RBP11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 ZFR2Q9UPR6 939 aaKnown RBP11.91□□□□□ -0.5
HMGXB3-203ENST00000510472 DUSP10Q9Y6W6 482 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms