RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 MON1AQ86VX9 555 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 WDR5BQ86VZ2 330 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.14□□□□□ -1.75
CAST-229ENST00000510098 FAM185AQ8N0U4 392 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 SLC25A41Q8N5S1 370 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 TSPYL6Q8N831 410 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 NKAIN3Q8N8D7 197 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 CMASQ8NFW8 434 aaPredicted RBP4.14□□□□□ -1.75
CAST-229ENST00000510098 MPLKIPQ8TAP9 179 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 WIPF2Q8TF74 440 aaPredicted RBP4.14□□□□□ -1.75
CAST-229ENST00000510098 ZUFSPQ96AP4 578 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 ELP4Q96EB1 424 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 KIF1BPQ96EK5 621 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 FUZQ9BT04 418 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 TRMOQ9BU70 441 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 TTYH1Q9H313 450 aaPredicted RBP4.14□□□□□ -1.75
CAST-229ENST00000510098 SLC32A1Q9H598 525 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 PRKRIP1Q9H875 184 aaPredicted RBP4.14□□□□□ -1.75
CAST-229ENST00000510098 PREBQ9HCU5 417 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 BEX4Q9NWD9 120 aaPredicted RBP4.14□□□□□ -1.75
CAST-229ENST00000510098 HEY2Q9UBP5 337 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 CDH22Q9UJ99 828 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 CNPY2Q9Y2B0 182 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 HS3ST3B1Q9Y662 390 aa4.14□□□□□ -1.75
CAST-229ENST00000510098 CACNA1IQ9P0X4 2223 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 GOLGA6L10A0A0M3HER8 536 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.13□□□□□ -1.75
CAST-229ENST00000510098 TARSL2A2RTX5 802 aaKnown RBP4.13□□□□□ -1.75
CAST-229ENST00000510098 PROB1E7EW31 1015 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 CEP104O60308 925 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 PLOD3O60568 738 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 CNOT3O75175 753 aaKnown RBP4.13□□□□□ -1.75
CAST-229ENST00000510098 ATP1A3P13637 1013 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 ABCD3P28288 659 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 CLCNKBP51801 687 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 NR1H2P55055 460 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 CCNG2Q16589 344 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 BAK1Q16611 211 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 FBXO43Q4G163 708 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 GPATCH4Q5T3I0 446 aaKnown RBP4.13□□□□□ -1.75
CAST-229ENST00000510098 UBAP2Q5T6F2 1119 aaKnown RBP4.13□□□□□ -1.75
CAST-229ENST00000510098 FAM69AQ5T7M9 428 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 ACAD10Q6JQN1 1059 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 PIM3Q86V86 326 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 ARFGAP1Q8N6T3 406 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 ZCCHC10Q8TBK6 192 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 TBC1D22AQ8WUA7 517 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 ZFYVE19Q96K21 471 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 WDR83Q9BRX9 315 aaKnown RBP4.13□□□□□ -1.75
CAST-229ENST00000510098 CENPOQ9BU64 300 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 RETREG1Q9H6L5 497 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 IRAK4Q9NWZ3 460 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 NKIRAS2Q9NYR9 191 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 GRHL1Q9NZI5 618 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 IL1RAPL1Q9NZN1 696 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 MSRB1Q9NZV6 116 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 FBXO40Q9UH90 709 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 RAP2CQ9Y3L5 183 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 CYP46A1Q9Y6A2 500 aa4.13□□□□□ -1.75
CAST-229ENST00000510098 A0A0A0MQY5 61 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 C17orf113A0A1B0GUU1 675 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 GAGE10A6NGK3 116 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 F5H0A9 414 aaPredicted RBP4.12□□□□□ -1.75
CAST-229ENST00000510098 H3BNX3 289 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 KIF1CO43896 1103 aaKnown RBP4.12□□□□□ -1.75
CAST-229ENST00000510098 ADAP00813 363 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 SERPINC1P01008 464 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 CHRNB1P11230 501 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 YWHAQP27348 245 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 KRT20P35900 424 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 CASP6P55212 293 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 ZBED6P86452 979 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 SRSF1Q07955 248 aaKnown RBP eCLIP4.12□□□□□ -1.75
CAST-229ENST00000510098 MTX1Q13505 466 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 EDRF1Q3B7T1 1238 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 SYTL3Q4VX76 610 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 CCDC92Q53HC0 331 aaPredicted RBP4.12□□□□□ -1.75
CAST-229ENST00000510098 SLC45A4Q5BKX6 768 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 ZNF766Q5HY98 468 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 PIK3CD-AS1Q5SR53 167 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 CCDC30Q5VVM6 783 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 IL20RBQ6UXL0 311 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 NEK10Q6ZWH5 1172 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 KDELC2Q7Z4H8 507 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 ZSCAN30Q86W11 494 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 ARMC8Q8IUR7 673 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 CPXM2Q8N436 756 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 LSMEM1Q8N8F7 131 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 LRRC57Q8N9N7 239 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 ZNF548Q8NEK5 533 aaPredicted RBP4.12□□□□□ -1.75
CAST-229ENST00000510098 HDAC7Q8WUI4 952 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 NSMCE1Q8WV22 266 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 RSRC1Q96IZ7 334 aaKnown RBP4.12□□□□□ -1.75
CAST-229ENST00000510098 MPHOSPH8Q99549 860 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 BARD1Q99728 777 aaKnown RBP4.12□□□□□ -1.75
CAST-229ENST00000510098 TREX2Q9BQ50 279 aaPredicted RBP4.12□□□□□ -1.75
CAST-229ENST00000510098 CLSTN3Q9BQT9 956 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 CHCHD6Q9BRQ6 235 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 AGXT2Q9BYV1 514 aa4.12□□□□□ -1.75
CAST-229ENST00000510098 CXorf56Q9H5V9 222 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms