RNA–Protein interactions for RNA: ENST00000509995.5

SNF8-207, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-207ENST00000509995 OAS3Q9Y6K5 1087 aaKnown RBP11□□□□□ -0.65
SNF8-207ENST00000509995 IGHV5-10-1A0A0J9YXX1 117 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 LRRIQ3A6PVS8 624 aaPredicted RBP10.99□□□□□ -0.65
SNF8-207ENST00000509995 TULP2O00295 520 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 CLIC2O15247 247 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 PRNPP04156 253 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 RPN1P04843 607 aaKnown RBP10.99□□□□□ -0.65
SNF8-207ENST00000509995 ADRB3P13945 408 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 CD58P19256 250 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 PDCP20941 246 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 NEK3P51956 506 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 HK3P52790 923 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 PLK1P53350 603 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 ANAPC15P60006 121 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 YPEL5P62699 121 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 CLDN10P78369 228 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 ADIGQ0VDE8 80 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 SGCGQ13326 291 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 DCAF12Q5T6F0 453 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 SV2BQ7L1I2 683 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 LGI2Q8N0V4 545 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 AGBL5Q8NDL9 886 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 OR2A12Q8NGT7 310 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 KCTD13Q8WZ19 329 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 PPP1R16AQ96I34 528 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 FCRL2Q96LA5 508 aaPredicted RBP10.99□□□□□ -0.65
SNF8-207ENST00000509995 CCDC114Q96M63 670 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 NUDT22Q9BRQ3 303 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 SPRY4Q9C004 299 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 SLC39A1Q9NY26 324 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 LRIT1Q9P2V4 623 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 KCND3Q9UK17 655 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 POLHQ9Y253 713 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 FADS3Q9Y5Q0 445 aa10.99□□□□□ -0.65
SNF8-207ENST00000509995 MRPS18BQ9Y676 258 aaKnown RBP10.99□□□□□ -0.65
SNF8-207ENST00000509995 IGLON5A6NGN9 336 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 AP1G1O43747 822 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 CTSEP14091 401 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 VARSP26640 1264 aaKnown RBP10.98□□□□□ -0.65
SNF8-207ENST00000509995 IGFALSP35858 605 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 SLC8A3P57103 927 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 RAB15P59190 212 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 B4GALNT1Q00973 533 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 ARHGEF7Q14155 803 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 NR6A1Q15406 480 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 ZACNQ401N2 412 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 ANKS6Q68DC2 871 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 GDF7Q7Z4P5 450 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 HID1Q8IV36 788 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 GRIN3AQ8TCU5 1115 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 PARD3BQ8TEW8 1205 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 TEFMQ96QE5 360 aaKnown RBP10.98□□□□□ -0.65
SNF8-207ENST00000509995 DNAI2Q9GZS0 605 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 CYP3A43Q9HB55 503 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 LRRC4Q9HBW1 653 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 RRN3Q9NYV6 651 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 MAP10Q9P2G4 905 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 PCDHB3Q9Y5E6 796 aa10.98□□□□□ -0.65
SNF8-207ENST00000509995 B4E171 279 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 NUDT21O43809 227 aaKnown RBP10.97□□□□□ -0.65
SNF8-207ENST00000509995 DNAJB5O75953 348 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 CD2BP2O95400 341 aaKnown RBP10.97□□□□□ -0.65
SNF8-207ENST00000509995 MOCS2O96007 188 aaPredicted RBP10.97□□□□□ -0.65
SNF8-207ENST00000509995 SRCP12931 536 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 EIF4A3P38919 411 aaKnown RBP10.97□□□□□ -0.65
SNF8-207ENST00000509995 TSPAN7P41732 249 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 TRA2AQ13595 282 aaKnown RBP eCLIP10.97□□□□□ -0.655e-7■■■■■ 28.8
SNF8-207ENST00000509995 HLTFQ14527 1009 aaKnown RBP eCLIP10.97□□□□□ -0.65
SNF8-207ENST00000509995 CLPPQ16740 277 aaPredicted RBP10.97□□□□□ -0.65
SNF8-207ENST00000509995 EDRF1Q3B7T1 1238 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 AMZ1Q400G9 498 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 C14orf28Q4W4Y0 310 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 ZNF394Q53GI3 561 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 SP5Q6BEB4 398 aaPredicted RBP10.97□□□□□ -0.65
SNF8-207ENST00000509995 MCTP1Q6DN14 999 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 CXorf57Q6NSI4 855 aaKnown RBP10.97□□□□□ -0.65
SNF8-207ENST00000509995 KDELC2Q7Z4H8 507 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 CIR1Q86X95 450 aaPredicted RBP10.97□□□□□ -0.65
SNF8-207ENST00000509995 FAM129CQ86XR2 697 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 XYLT1Q86Y38 959 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 SFTPA2Q8IWL1 248 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 CCDC65Q8IXS2 484 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 NRSN1Q8IZ57 195 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 CCAR2Q8N163 923 aaKnown RBP10.97□□□□□ -0.65
SNF8-207ENST00000509995 SIX6OS1Q8N1H7 587 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 Q8NA96 180 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 ANKRD52Q8NB46 1076 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 CHST14Q8NCH0 376 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 ASB12Q8WXK4 309 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 TATDN2Q93075 761 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 CENPTQ96BT3 561 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 RTP4Q96DX8 246 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 ALG14Q96F25 216 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 EPSTI1Q96J88 318 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 XPO7Q9UIA9 1087 aaKnown RBP10.97□□□□□ -0.65
SNF8-207ENST00000509995 HS3ST2Q9Y278 367 aa10.97□□□□□ -0.65
SNF8-207ENST00000509995 TCAF2A6NFQ2 919 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 XPO1O14980 1071 aaKnown RBP10.96□□□□□ -0.65
SNF8-207ENST00000509995 SPTLC2O15270 562 aa10.96□□□□□ -0.65
SNF8-207ENST00000509995 B4GAT1O43505 415 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms