RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 SPHK2Q9NRA0 654 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 RIC8BQ9NVN3 520 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 RAI2Q9Y5P3 530 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 TCRBV21S2A2A0A5A6 115 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 RAD51BO15315 384 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 COCHO43405 550 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 TBX18O95935 607 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 CXCL10P02778 98 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 RBP1P09455 135 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 NEK3P51956 506 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 NRLP54845 237 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 LRRC8EQ6NSJ5 796 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 BBS12Q6ZW61 710 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 CIR1Q86X95 450 aaPredicted RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 CACNA2D3Q8IZS8 1091 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 OR10T2Q8NGX3 314 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 C9orf72Q96LT7 481 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 TUBB6Q9BUF5 446 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 KATNBL1Q9H079 304 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 OSBPL2Q9H1P3 480 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 GRID1Q9ULK0 1009 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 PHTF1Q9UMS5 762 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 APOBEC2Q9Y235 224 aaKnown RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 ZBTB42B2RXF5 422 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 ZBTB14O43829 449 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 TM7SF2O76062 418 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 SLC25A14O95258 325 aaPredicted RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 MPOP05164 745 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 CLCN6P51797 869 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 LINGO4Q6UY18 593 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 FAM3CQ92520 227 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 ARHGEF2Q92974 986 aaKnown RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 TMEM209Q96SK2 561 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 VCXQ9H320 206 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 ZFYVE1Q9HBF4 777 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 GULP1Q9UBP9 304 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 DCDC2Q9UHG0 476 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 GPN3Q9UHW5 284 aaPredicted RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 DNALI1O14645 258 aaPredicted RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 INSIG1O15503 277 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 CDH16O75309 829 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 ANXA6P08133 673 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 MAPK1P28482 360 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 ILF3Q12906 894 aaKnown RBP eCLIP5.19□□□□□ -1.583e-7■■■■□ 22.6
PHF3-210ENST00000509876 MMRN1Q13201 1228 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 RUNX3Q13761 415 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 TAF11Q15544 211 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 CYP2A13Q16696 494 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 PAPD7Q5XG87 772 aaKnown RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 LRIG3Q6UXM1 1119 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 ZNF783Q6ZMS7 281 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 RABEPKQ7Z6M1 372 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 SYTL1Q8IYJ3 562 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 PCDH20Q8N6Y1 951 aaKnown RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 OR7D4Q8NG98 312 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 MED8Q96G25 268 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 CPNE1Q99829 537 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 ROPN1BQ9BZX4 212 aaPredicted RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 ROPN1Q9HAT0 212 aaPredicted RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 GLOD4Q9HC38 313 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 GPAMQ9HCL2 828 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 SUSD2Q9UGT4 822 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 NDOR1Q9UHB4 597 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 NOCTQ9UK39 431 aaKnown RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 TMCO1Q9UM00 188 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 MATN3O15232 486 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 LRIG2O94898 1065 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 ITGB6P18564 788 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 CRABP2P29373 138 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 DPP6P42658 865 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 MAXP61244 160 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 MS4A13Q5J8X5 152 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 ESRP1Q6NXG1 681 aaKnown RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 RNF217Q8TC41 542 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 MSANTD3Q96H12 275 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 FERD3LQ96RJ6 166 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 PRPF18Q99633 342 aaKnown RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 IL12RB2Q99665 862 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 PAAF1Q9BRP4 392 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 TRIM55Q9BYV6 548 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 SLC2A11Q9BYW1 496 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 TRIM15Q9C019 465 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 COG4Q9H9E3 785 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 INTS7Q9NVH2 962 aaKnown RBP5.19□□□□□ -1.58
PHF3-210ENST00000509876 STK38LQ9Y2H1 464 aa5.19□□□□□ -1.58
PHF3-210ENST00000509876 LILRB3O75022 631 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 RASGRP1O95267 797 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 CATP04040 527 aaKnown RBP5.18□□□□□ -1.58
PHF3-210ENST00000509876 ITGAVP06756 1048 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 FMO4P31512 558 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 SPAM1P38567 509 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 ART3Q13508 389 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 LY6G5CQ5SRR4 150 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 DET1Q7L5Y6 550 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 TAF8Q7Z7C8 310 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 LMNTD2Q8IXW0 634 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 CLEC4CQ8WTT0 213 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 SLC35F5Q8WV83 523 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 SDCCAG3Q96C92 435 aa5.18□□□□□ -1.58
PHF3-210ENST00000509876 LACRTQ9GZZ8 138 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms