RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 LSSP48449 732 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 DNA2P51530 1060 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 PDX1P52945 283 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 NOMO3P69849 1222 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 SKOR1P84550 965 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 C1orf61Q13536 156 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 ISXQ2M1V0 245 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 C15orf59Q2T9L4 293 aaPredicted RBP16.2■□□□□ 0.18
RAB40C-202ENST00000509637 DEFB133Q30KQ1 61 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 LRRC73Q5JTD7 316 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 KLHDC7AQ5VTJ3 777 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 ZDHHC17Q8IUH5 632 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 TMEM35BQ8NCS4 154 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 JOSD2Q8TAC2 188 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 SLC20A1Q8WUM9 679 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 CENPTQ96BT3 561 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 CLPBQ9H078 707 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 NDST4Q9H3R1 872 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 NOL6Q9H6R4 1146 aaKnown RBP16.2■□□□□ 0.18
RAB40C-202ENST00000509637 SYNCQ9H7C4 482 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 ATP13A1Q9HD20 1204 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 FARP1Q9Y4F1 1045 aaPredicted RBP16.2■□□□□ 0.18
RAB40C-202ENST00000509637 ENTPD2Q9Y5L3 495 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 ZNF462Q96JM2 2506 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 TEX51A0A1B0GUA7 166 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 C16orf96A6NNT2 1141 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 AREL1O15033 823 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 AP1G1O43747 822 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 F9P00740 461 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 IGFALSP35858 605 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 RPS21P63220 83 aaKnown RBP16.19■□□□□ 0.18
RAB40C-202ENST00000509637 ATP11AP98196 1134 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 MTA1Q13330 715 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 MAN2A1Q16706 1144 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 CCDC14Q49A88 953 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 VWA3BQ502W6 1294 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 ARHGAP40Q5TG30 622 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 KCTD16Q68DU8 428 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 LRRC31Q6UY01 552 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 PCDH20Q8N6Y1 951 aaKnown RBP16.19■□□□□ 0.18
RAB40C-202ENST00000509637 ARHGEF2Q92974 986 aaKnown RBP16.19■□□□□ 0.18
RAB40C-202ENST00000509637 ATXN7L3BQ96GX2 97 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 VCPIP1Q96JH7 1222 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 FEM1CQ96JP0 617 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 ZNF578Q96N58 590 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-202ENST00000509637 LENG8Q96PV6 779 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-202ENST00000509637 ZYG11BQ9C0D3 744 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 CEP44Q9C0F1 390 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 ZDHHC6Q9H6R6 413 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 POLR1BQ9H9Y6 1135 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 DYRK4Q9NR20 520 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 MBNL1Q9NR56 388 aaKnown RBP16.19■□□□□ 0.18
RAB40C-202ENST00000509637 HECAQ9UBI9 543 aaPredicted RBP16.19■□□□□ 0.18
RAB40C-202ENST00000509637 STAP1Q9ULZ2 295 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 SATB2Q9UPW6 733 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 LRRK1Q38SD2 2015 aa16.19■□□□□ 0.18
RAB40C-202ENST00000509637 SETXQ7Z333 2677 aaKnown RBP16.19■□□□□ 0.18
RAB40C-202ENST00000509637 CPED1A4D0V7 1026 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 EFSO43281 561 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 GP1BAP07359 652 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 JUNDP17535 347 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 KLK7P49862 253 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 HNRNPKP61978 463 aaKnown RBP eCLIP16.18■□□□□ 0.18
RAB40C-202ENST00000509637 SLC20A2Q08357 652 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 PTP4A2Q12974 167 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 RAPGEF1Q13905 1077 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 PDE1CQ14123 709 aaPredicted RBP16.18■□□□□ 0.18
RAB40C-202ENST00000509637 ATXN7L2Q5T6C5 722 aaPredicted RBP16.18■□□□□ 0.18
RAB40C-202ENST00000509637 NAA35Q5VZE5 725 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 KIAA1161Q6NSJ0 714 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 ZNF783Q6ZMS7 281 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 EFL1Q7Z2Z2 1120 aaKnown RBP16.18■□□□□ 0.18
RAB40C-202ENST00000509637 SLC35F3Q8IY50 421 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 LSM14AQ8ND56 463 aaKnown RBP16.18■□□□□ 0.18
RAB40C-202ENST00000509637 ZNF248Q8NDW4 579 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 GPT2Q8TD30 523 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 LMX1AQ8TE12 382 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 EPS8L1Q8TE68 723 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 TTC9Q92623 222 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 CCDC114Q96M63 670 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 DEPDC7Q96QD5 511 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 LGMNQ99538 433 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 METTL5Q9NRN9 209 aaKnown RBP16.18■□□□□ 0.18
RAB40C-202ENST00000509637 SAMSN1Q9NSI8 373 aaKnown RBP16.18■□□□□ 0.18
RAB40C-202ENST00000509637 PPARGC1AQ9UBK2 798 aaKnown RBP16.18■□□□□ 0.18
RAB40C-202ENST00000509637 DNAI1Q9UI46 699 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 NOCTQ9UK39 431 aaKnown RBP16.18■□□□□ 0.18
RAB40C-202ENST00000509637 COL6A6A6NMZ7 2263 aa16.18■□□□□ 0.18
RAB40C-202ENST00000509637 EME2A4GXA9 379 aaPredicted RBP16.17■□□□□ 0.18
RAB40C-202ENST00000509637 PYCARD-AS1I3L0S3 204 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 EPHB6O15197 1021 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 AQP9O43315 295 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 ADRA1BP35368 520 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 CFHR1Q03591 330 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 DPCR1Q3MIW9 517 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 C3orf38Q5JPI3 329 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 RETSATQ6NUM9 610 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 PARGQ86W56 976 aa16.17■□□□□ 0.18
RAB40C-202ENST00000509637 DCP2Q8IU60 420 aaKnown RBP16.17■□□□□ 0.18
RAB40C-202ENST00000509637 PLPP6Q8IY26 295 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms