RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 SERINC3Q13530 473 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 PPP6R3Q5H9R7 873 aaPredicted RBP18.96■□□□□ 0.63
UBE3D-207ENST00000509102 KCNT1Q5JUK3 1230 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 KIAA1161Q6NSJ0 714 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 LEKR1Q6ZMV7 388 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 DBX2Q6ZNG2 339 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 GLRX5Q86SX6 157 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 DNAAF5Q86Y56 855 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 RAB7BQ96AH8 199 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 HMCESQ96FZ2 354 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 FEM1CQ96JP0 617 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 SNRNP25Q9BV90 132 aaKnown RBP18.96■□□□□ 0.63
UBE3D-207ENST00000509102 ZWILCHQ9H900 591 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 ERVMER34-1Q9H9K5 563 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 GPATCH2LQ9NWQ4 482 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 ACTL7AQ9Y615 435 aa18.96■□□□□ 0.63
UBE3D-207ENST00000509102 TPRP12270 2363 aaKnown RBP18.96■□□□□ 0.63
UBE3D-207ENST00000509102 ARHGAP42A6NI28 874 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 SLC31A1O15431 190 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 CBFA2T3O75081 653 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 CD160O95971 181 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 WNT1P04628 370 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 ITGAVP06756 1048 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 HNRNPA2B1P22626 353 aaKnown RBP18.95■□□□□ 0.62
UBE3D-207ENST00000509102 PCK1P35558 622 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 FAM193AP78312 1265 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 IL9RQ01113 521 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 TRIM14Q14142 442 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 PIGHQ14442 188 aaPredicted RBP18.95■□□□□ 0.62
UBE3D-207ENST00000509102 TSR1Q2NL82 804 aaKnown RBP18.95■□□□□ 0.62
UBE3D-207ENST00000509102 MYLK3Q32MK0 819 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 ZNF805Q5CZA5 627 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 HGSNATQ68CP4 663 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 RFX8Q6ZV50 586 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 OR6K2Q8NGY2 324 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 FAM174AQ8TBP5 190 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 KLHDC7BQ96G42 594 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 SCNM1Q9BWG6 230 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 XPO4Q9C0E2 1151 aaKnown RBP18.95■□□□□ 0.62
UBE3D-207ENST00000509102 TSPY26PQ9H489 355 aa18.95■□□□□ 0.62
UBE3D-207ENST00000509102 UBA2Q9UBT2 640 aaPredicted RBP18.95■□□□□ 0.62
UBE3D-207ENST00000509102 KNL1Q8NG31 2342 aa18.94■□□□□ 0.62
UBE3D-207ENST00000509102 AP1G1O43747 822 aa18.94■□□□□ 0.62
UBE3D-207ENST00000509102 LRCH4O75427 683 aa18.94■□□□□ 0.62
UBE3D-207ENST00000509102 GYPCP04921 128 aa18.94■□□□□ 0.62
UBE3D-207ENST00000509102 UGT2B4P06133 528 aa18.94■□□□□ 0.62
UBE3D-207ENST00000509102 FTH1P19P0C7X4 201 aa18.94■□□□□ 0.62
UBE3D-207ENST00000509102 PRLRP16471 622 aa18.94■□□□□ 0.62
UBE3D-207ENST00000509102 ARL4AP40617 200 aa18.94■□□□□ 0.62
UBE3D-207ENST00000509102 GRM3Q14832 879 aa18.94■□□□□ 0.62
UBE3D-207ENST00000509102 BOLA3Q53S33 107 aa18.94■□□□□ 0.62
UBE3D-207ENST00000509102 PARS2Q7L3T8 475 aaKnown RBP18.94■□□□□ 0.62
UBE3D-207ENST00000509102 NOL6Q9H6R4 1146 aaKnown RBP18.94■□□□□ 0.62
UBE3D-207ENST00000509102 ZNHIT6Q9NWK9 470 aaKnown RBP18.94■□□□□ 0.62
UBE3D-207ENST00000509102 IP6K2Q9UHH9 426 aa18.94■□□□□ 0.62
UBE3D-207ENST00000509102 NEUROG3Q9Y4Z2 214 aa18.94■□□□□ 0.62
UBE3D-207ENST00000509102 CEP295Q9C0D2 2601 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 C16orf96A6NNT2 1141 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 H3BRJ5 948 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 WNT9AO14904 365 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 TSPAN6O43657 245 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 HYAL3O43820 417 aaPredicted RBP18.93■□□□□ 0.62
UBE3D-207ENST00000509102 XPAP23025 273 aaPredicted RBP18.93■□□□□ 0.62
UBE3D-207ENST00000509102 CASP14P31944 242 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 SGCGQ13326 291 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 ZNF284Q2VY69 593 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 CCDC122Q5T0U0 273 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 CFAP58Q5T655 872 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 ATXN7L2Q5T6C5 722 aaPredicted RBP18.93■□□□□ 0.62
UBE3D-207ENST00000509102 ALKBH5Q6P6C2 394 aaKnown RBP18.93■□□□□ 0.62
UBE3D-207ENST00000509102 GDPD4Q6W3E5 623 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 LZTR1Q8N653 840 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 KLK6Q92876 244 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 KCTD15Q96SI1 283 aaPredicted RBP18.93■□□□□ 0.62
UBE3D-207ENST00000509102 MYOCQ99972 504 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 TRIM7Q9C029 511 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 THAP2Q9H0W7 228 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 FTSJ1Q9UET6 329 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 ANAPC7Q9UJX3 599 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 FADS3Q9Y5Q0 445 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 CHD8Q9HCK8 2581 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 CHD5Q8TDI0 1954 aa18.93■□□□□ 0.62
UBE3D-207ENST00000509102 TNFSF14O43557 240 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 SPINK2P20155 84 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 HCAR3P49019 387 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 CA9Q16790 459 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 PRAMEF14Q5SWL7 426 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 SPECC1LQ69YQ0 1117 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 ARFGAP1Q8N6T3 406 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 CELF6Q96J87 481 aaKnown RBP18.92■□□□□ 0.62
UBE3D-207ENST00000509102 KLHL32Q96NJ5 620 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 PEBP4Q96S96 227 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 NUP85Q9BW27 656 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 SLC17A9Q9BYT1 436 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 DEF6Q9H4E7 631 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 LRRC19Q9H756 370 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 SP110Q9HB58 689 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 MFHAS1Q9Y4C4 1052 aa18.92■□□□□ 0.62
UBE3D-207ENST00000509102 TMEM131Q92545 1883 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 A0A087X0T9 212 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms