RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FZD5Q13467 585 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 SMAD2Q15796 467 aaKnown RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 SEPT7Q16181 437 aaKnown RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 CCDC142Q17RM4 750 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 ASTE1Q2TB18 679 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 HECTD3Q5T447 861 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 MROH9Q5TGP6 573 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 PIK3R6Q5UE93 754 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 NAA35Q5VZE5 725 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 BTBD8Q5XKL5 378 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 ALKBH5Q6P6C2 394 aaKnown RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 GAREM2Q75VX8 874 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC26A9Q7LBE3 791 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 OTOP3Q7RTS5 596 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 GRASPQ7Z6J2 395 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 DDX42Q86XP3 938 aaKnown RBP eCLIP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 TMC8Q8IU68 726 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 MCOLN2Q8IZK6 566 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 C12orf76Q8N812 135 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 TP53I13Q8NBR0 393 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 C3orf20Q8ND61 904 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 SCAMP5Q8TAC9 235 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 PIP4K2CQ8TBX8 421 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC20A1Q8WUM9 679 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 UBE2Q2Q8WVN8 375 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 FBXW5Q969U6 566 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 MCRS1Q96EZ8 462 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 CPXM1Q96SM3 734 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 PCDHB18PQ96TA0 734 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 BAG1Q99933 345 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 NCAPGQ9BPX3 1015 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 PHF7Q9BWX1 381 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 ULBP1Q9BZM6 244 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 TASP1Q9H6P5 420 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 KIF9Q9HAQ2 790 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 TRPV4Q9HBA0 871 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 POPDC2Q9HBU9 364 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 MRPL47Q9HD33 250 aaKnown RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 OBP2AQ9NY56 170 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 ADAM22Q9P0K1 906 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 EPS15L1Q9UBC2 864 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 MCM8Q9UJA3 840 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 MAGED2Q9UNF1 606 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 NR2E1Q9Y466 385 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 USP15Q9Y4E8 981 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 SCINQ9Y6U3 715 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 MYO10Q9HD67 2058 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 DENND4AQ7Z401 1863 aa5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 NUP210Q8TEM1 1887 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P44-201ENST00000508597 TRAV19A0A0A6YYK7 116 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 A0A1B0GTL3 188 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 TCRBV5S2A0A599 114 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 CCDC66A2RUB6 948 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 SIGLEC16A6NMB1 481 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 EIF3CLB5ME19 914 aaKnown RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 E5RJQ4 531 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 H3BQ06 376 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 CBX4O00257 560 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 TULP2O00295 520 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 ARHGAP6O43182 974 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 PAPSS1O43252 624 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 MOSPD3O75425 235 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 OLFM2O95897 454 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 F9P00740 461 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 OAS1P00973 400 aaKnown RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 CALCAP01258 141 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 FTLP02792 175 aaPredicted RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 ERBB2P04626 1255 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 H2AFZP0C0S5 128 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 MYL4P12829 197 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 NCAM1P13591 858 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 HDCP19113 662 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 ATP5C1P36542 298 aaKnown RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 AVPR1AP37288 418 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 STAT5AP42229 794 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 MATKP42679 507 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC6A11P48066 632 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 RGS7P49802 495 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 MECP2P51608 486 aaKnown RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 YWHAGP61981 247 aaKnown RBP eCLIP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 YWHAZP63104 245 aaKnown RBP5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 GPC5P78333 572 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 SLC7A9P82251 487 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 COG7P83436 770 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 GOLGA8FQ08AF8 430 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 GOLGA8DPQ0D2H9 430 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 PTP4A2Q12974 167 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 ACAP1Q15027 740 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 SPA17Q15506 151 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 PTPN20Q4JDL3 420 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 TMEM177Q53S58 311 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 CCDC122Q5T0U0 273 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 SDHAF4Q5VUM1 108 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 BSPRYQ5W0U4 402 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 OR6B2Q6IFH4 312 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 PLEKHA7Q6IQ23 1121 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 MSANTD2Q6P1R3 559 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 OLFML1Q6UWY5 402 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 SPOCD1Q6ZMY3 1216 aa5.7□□□□□ -1.5
HMGB1P44-201ENST00000508597 H2AFVQ71UI9 128 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms