RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 FADS3Q9Y5Q0 445 aa16.51■□□□□ 0.23
LMNA-222ENST00000508500 SHROOM3Q8TF72 1996 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 CXorf51AA0A1B0GTR3 108 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 YKT6O15498 198 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 SPINT1O43278 529 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 SDC3O75056 442 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 PCDH8O95206 1070 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 LDOC1O95751 146 aaPredicted RBP16.5■□□□□ 0.23
LMNA-222ENST00000508500 THEGLP0DJG4 465 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 ADRB3P13945 408 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 FERP16591 822 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 ITGB7P26010 798 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 ABL2P42684 1182 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 RECQLP46063 649 aaPredicted RBP16.5■□□□□ 0.23
LMNA-222ENST00000508500 ARRB1P49407 418 aaPredicted RBP16.5■□□□□ 0.23
LMNA-222ENST00000508500 NEK3P51956 506 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 OVGP1Q12889 678 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 INAVAQ3KP66 663 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 PLPP6Q8IY26 295 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 SLC22A18ASQ8N1D0 253 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 SLC25A45Q8N413 288 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 OR13H1Q8NG92 308 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 KLHDC7BQ96G42 594 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 BMFQ96LC9 184 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 ZDHHC6Q9H6R6 413 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 DYRK4Q9NR20 520 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 HECAQ9UBI9 543 aaPredicted RBP16.5■□□□□ 0.23
LMNA-222ENST00000508500 GGT7Q9UJ14 662 aa16.5■□□□□ 0.23
LMNA-222ENST00000508500 COL27A1Q8IZC6 1860 aaPredicted RBP16.5■□□□□ 0.23
LMNA-222ENST00000508500 LRP4O75096 1905 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 RAD51BO15315 384 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 KDELR3O43731 214 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 RAMP2O60895 175 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 GIMD1P0DJR0 217 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 HNRNPA2B1P22626 353 aaKnown RBP16.49■□□□□ 0.23
LMNA-222ENST00000508500 ACADVLP49748 655 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 RP1P56715 2156 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 POLD3Q15054 466 aaPredicted RBP16.49■□□□□ 0.23
LMNA-222ENST00000508500 DNAJC24Q6P3W2 148 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 SCYL2Q6P3W7 929 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 KDM7AQ6ZMT4 941 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 ABI3BPQ7Z7G0 1075 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 OXR1Q8N573 874 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 ARFGAP1Q8N6T3 406 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 PPP1R16AQ96I34 528 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 NAP1L5Q96NT1 182 aaPredicted RBP16.49■□□□□ 0.23
LMNA-222ENST00000508500 BPIFA3Q9BQP9 254 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 GPR27Q9NS67 375 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 UCKL1Q9NWZ5 548 aa16.49■□□□□ 0.23
LMNA-222ENST00000508500 SMG1Q96Q15 3661 aaKnown RBP16.48■□□□□ 0.23
LMNA-222ENST00000508500 POM121BA6NF01 834 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 TRABD2BA6NFA1 517 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 LRRC53A6NM62 1247 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 TRIM38O00635 465 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 MAGEC1O60732 1142 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 GSRP00390 522 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 EPHB2P29323 1055 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 ETFBP38117 255 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 CCDC15Q0P6D6 951 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 ACAP1Q15027 740 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 ATXN7L2Q5T6C5 722 aaPredicted RBP16.48■□□□□ 0.23
LMNA-222ENST00000508500 GALNT15Q8N3T1 639 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 RTL3Q8N8U3 475 aaKnown RBP16.48■□□□□ 0.23
LMNA-222ENST00000508500 OR2AP1Q8NGE2 309 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 KLF6Q99612 283 aaPredicted RBP16.48■□□□□ 0.23
LMNA-222ENST00000508500 CNPY3Q9BT09 278 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 FUCA2Q9BTY2 467 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 SLC17A9Q9BYT1 436 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 ITM2BQ9Y287 266 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 PCDHGA1Q9Y5H4 931 aa16.48■□□□□ 0.23
LMNA-222ENST00000508500 SYCE3A1L190 88 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 C16orf96A6NNT2 1141 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 WASH4PA8MWX3 477 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 TMCO5BA8MYB1 307 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 ATMINO43313 823 aaPredicted RBP16.47■□□□□ 0.23
LMNA-222ENST00000508500 AP1G1O43747 822 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 CREB3O43889 395 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 PAK4O96013 591 aaPredicted RBP16.47■□□□□ 0.23
LMNA-222ENST00000508500 TNFAIP3P21580 790 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 MAMLD1Q13495 774 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 IQCB1Q15051 598 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 CA9Q16790 459 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 MYLK3Q32MK0 819 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 PROX2Q3B8N5 592 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 SOWAHCQ53LP3 525 aaPredicted RBP16.47■□□□□ 0.23
LMNA-222ENST00000508500 TPRG1LQ5T0D9 272 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 PLEKHA7Q6IQ23 1121 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 FBXL19Q6PCT2 694 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 RYBPQ8N488 228 aaPredicted RBP16.47■□□□□ 0.23
LMNA-222ENST00000508500 HMCESQ96FZ2 354 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 KLHL32Q96NJ5 620 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 TRIM7Q9C029 511 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 TTYH3Q9C0H2 523 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 CCDC86Q9H6F5 360 aaKnown RBP16.47■□□□□ 0.23
LMNA-222ENST00000508500 KLHL11Q9NVR0 708 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 GPATCH2LQ9NWQ4 482 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 MYO6Q9UM54 1294 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 HS3ST3A1Q9Y663 406 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 BPTFQ12830 3046 aa16.47■□□□□ 0.23
LMNA-222ENST00000508500 RASA4BC9J798 803 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms