RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 CD70P32970 193 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 HTR7P34969 479 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 DRD3P35462 400 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 VASPP50552 380 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 CCR5P51681 352 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 ZNF135P52742 658 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 ZNF143P52747 638 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 PDX1P52945 283 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 CDH4P55283 916 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 PITX1P78337 314 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 ZNF211Q13398 564 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 AUHQ13825 339 aaKnown RBP9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 CST6Q15828 149 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 OTUD1Q5VV17 481 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 RAP1GAP2Q684P5 730 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 NADSYN1Q6IA69 706 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 PLEKHA7Q6IQ23 1121 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 RFWD3Q6PCD5 774 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 ZNF571Q7Z3V5 609 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 CNGA4Q8IV77 575 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 VSTM4Q8IW00 320 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 LGI2Q8N0V4 545 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 RNF214Q8ND24 703 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 OR8K1Q8NGG5 319 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 OR4C6Q8NH72 309 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 RXFP2Q8WXD0 754 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 CENPIQ92674 756 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 SERAC1Q96JX3 654 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 PRICKLE1Q96MT3 831 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 SLC46A1Q96NT5 459 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 RPRD1AQ96P16 312 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 CNPY3Q9BT09 278 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 PIGVQ9NUD9 493 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 COX16Q9P0S2 106 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 INTS6Q9UL03 887 aaKnown RBP9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 FZD4Q9ULV1 537 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 PLA2G4CQ9UP65 541 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 SATB2Q9UPW6 733 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 HS3ST4Q9Y661 456 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 CELSR2Q9HCU4 2923 aa9.42□□□□□ -0.9
UBE2D3-223ENST00000508249 ZFC3H1O60293 1989 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 GOLGA6L7A0A1B0GV03 622 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 TCRBV5S1A1TA0A578 114 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 DDX3XO00571 662 aaKnown RBP eCLIP9.41□□□□□ -0.92e-17■■■■□ 23.8
UBE2D3-223ENST00000508249 PAGE1O75459 146 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 SRPRAP08240 638 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 CKMT1AP12532 417 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 CR2P20023 1033 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 RRM1P23921 792 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 CASP14P31944 242 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 ETFBP38117 255 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 NNMTP40261 264 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 PLK1P53350 603 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 ST8SIA6P61647 398 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 E2F1Q01094 437 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 SFSWAPQ12872 951 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 ZNF177Q13360 481 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 ISXQ2M1V0 245 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 HNRNPA1L2Q32P51 320 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 CCDC14Q49A88 953 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 C3orf38Q5JPI3 329 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 PPP1R15BQ5SWA1 713 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 C6orf132Q5T0Z8 1188 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 C9orf64Q5T6V5 341 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 HGSNATQ68CP4 663 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 MBLAC2Q68D91 279 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 NAPEPLDQ6IQ20 393 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 FBXL22Q6P050 247 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 WDR59Q6PJI9 974 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 ZNF783Q6ZMS7 281 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 ZNF574Q6ZN55 896 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 CLEC14AQ86T13 490 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 SETD3Q86TU7 594 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 LSMEM2Q8N112 164 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 CARNMT1Q8N4J0 409 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 OXR1Q8N573 874 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 MFSD2AQ8NA29 543 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 TTC17Q96AE7 1141 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 MYEOVQ96EZ4 313 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 CFAP57Q96MR6 1250 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 DEPDC7Q96QD5 511 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 DNAJC7Q99615 494 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 ISCUQ9H1K1 167 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 OSBPL2Q9H1P3 480 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 THSD1Q9NS62 852 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 PPARGC1AQ9UBK2 798 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 SUN2Q9UH99 717 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 SCML1Q9UN30 329 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 CA5BQ9Y2D0 317 aa9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 SPTBN1Q01082 2364 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-223ENST00000508249 ICE1Q9Y2F5 2266 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 IGLV3-10A0A075B6K4 115 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 DRGXA6NNA5 263 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 FTLP02792 175 aaPredicted RBP9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 TGM2P21980 687 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 DGKAP23743 735 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 RFC1P35251 1148 aaPredicted RBP9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 ADRA1BP35368 520 aa9.4□□□□□ -0.9
UBE2D3-223ENST00000508249 RPS24P62847 133 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms