RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 CPEB1Q9BZB8 566 aaKnown RBP20.37■□□□□ 0.85
USP53-203ENST00000507597 TNKS2Q9H2K2 1166 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 SCUBE2Q9NQ36 999 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 FBXO4Q9UKT5 387 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 NCKAP1Q9Y2A7 1128 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 TTLL3Q9Y4R7 772 aa20.37■□□□□ 0.85
USP53-203ENST00000507597 TTC28Q96AY4 2481 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 TCRBV7S2A1N4TA0A589 114 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 GOLGA6CA6NDK9 693 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 GOLGA6BA6NDN3 693 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 CCDC188H7C350 402 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 URI1O94763 535 aaPredicted RBP20.36■□□□□ 0.85
USP53-203ENST00000507597 ITGAVP06756 1048 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 GOLGA6DP0CG33 693 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 NFKBIAP25963 317 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 HOXA6P31267 233 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 PRPSAP1Q14558 356 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 CFAP58Q5T655 872 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 PKN3Q6P5Z2 889 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 TMEM92Q6UXU6 159 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 DPY19L3Q6ZPD9 716 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 GSTA5Q7RTV2 222 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 SRLQ86TD4 932 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 TMPRSS6Q8IU80 811 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 STK40Q8N2I9 435 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 TSEN2Q8NCE0 465 aaKnown RBP20.36■□□□□ 0.85
USP53-203ENST00000507597 ATL2Q8NHH9 583 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 C1orf54Q8WWF1 131 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 MAGOHBQ96A72 148 aaKnown RBP20.36■□□□□ 0.85
USP53-203ENST00000507597 CAPZA3Q96KX2 299 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 FAM126AQ9BYI3 521 aaPredicted RBP20.36■□□□□ 0.85
USP53-203ENST00000507597 RSPH9Q9H1X1 276 aaPredicted RBP20.36■□□□□ 0.85
USP53-203ENST00000507597 ATP13A3Q9H7F0 1226 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 GOLGA6AQ9NYA3 693 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 LHX3Q9UBR4 397 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 DNPEPQ9ULA0 475 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 ACTL7AQ9Y615 435 aa20.36■□□□□ 0.85
USP53-203ENST00000507597 CCDC163A0A0D9SF12 145 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 FAM86C2PA6NEL3 165 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 ZNF185O15231 689 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 OPHN1O60890 802 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 ZNF217O75362 1048 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 IL1BP01584 269 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 C5AR1P21730 350 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 PTPN3P26045 913 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 SERPINA4P29622 427 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 BCL2L1Q07817 233 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 CREG2Q8IUH2 290 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 CCDC89Q8N998 374 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 HCAR2Q8TDS4 363 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 TEKT5Q96M29 485 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 ZNF641Q96N77 438 aaPredicted RBP20.35■□□□□ 0.85
USP53-203ENST00000507597 ZDHHC6Q9H6R6 413 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 EBF1Q9UH73 591 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 R3HDM2Q9Y2K5 976 aaKnown RBP20.35■□□□□ 0.85
USP53-203ENST00000507597 ATP8A1Q9Y2Q0 1164 aa20.35■□□□□ 0.85
USP53-203ENST00000507597 C5orf60A6NFR6 353 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 ESPNB1AK53 854 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 RNF103O00237 685 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 INSIG1O15503 277 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 SERPINF2P08697 491 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 FNTAP49354 379 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 SATB1Q01826 763 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 SNX1Q13596 522 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 DNTTIP2Q5QJE6 756 aaKnown RBP20.34■□□□□ 0.85
USP53-203ENST00000507597 KBTBD6Q86V97 674 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 NDUFAF2Q8N183 169 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 C12orf50Q8NA57 414 aaPredicted RBP20.34■□□□□ 0.85
USP53-203ENST00000507597 HMGB4Q8WW32 186 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 AGAP3Q96P47 875 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 FAM129BQ96TA1 746 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 FAM118BQ9BPY3 351 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 EVLQ9UI08 416 aaPredicted RBP20.34■□□□□ 0.85
USP53-203ENST00000507597 CDC23Q9UJX2 597 aa20.34■□□□□ 0.85
USP53-203ENST00000507597 ANTXRLA6NF34 631 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 ZNF500O60304 480 aaPredicted RBP20.33■□□□□ 0.85
USP53-203ENST00000507597 PHF2O75151 1096 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 ZNF821O75541 412 aaPredicted RBP20.33■□□□□ 0.85
USP53-203ENST00000507597 VAV1P15498 845 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 COL9A1P20849 921 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 POLR2LP62875 67 aaKnown RBP20.33■□□□□ 0.85
USP53-203ENST00000507597 SIX1Q15475 284 aaPredicted RBP20.33■□□□□ 0.85
USP53-203ENST00000507597 OASLQ15646 514 aaKnown RBP20.33■□□□□ 0.85
USP53-203ENST00000507597 CST6Q15828 149 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 SLC14A2Q15849 920 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 CYP1B1Q16678 543 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 WHAMMP3Q1A5X7 153 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 P3H1Q32P28 736 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 ARSIQ5FYB1 569 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 ATXN7L2Q5T6C5 722 aaPredicted RBP20.33■□□□□ 0.85
USP53-203ENST00000507597 ALG1LQ6GMV1 187 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 ANO7Q6IWH7 933 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 KIAA1211LQ6NV74 962 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 KIAA1324Q6UXG2 1013 aaKnown RBP20.33■□□□□ 0.85
USP53-203ENST00000507597 GDPD4Q6W3E5 623 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 ARHGEF18Q6ZSZ5 1173 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 MMAAQ8IVH4 418 aaKnown RBP20.33■□□□□ 0.85
USP53-203ENST00000507597 PRELID2Q8N945 189 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 PIP4K2CQ8TBX8 421 aa20.33■□□□□ 0.85
USP53-203ENST00000507597 GANCQ8TET4 914 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms