RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 RYBPQ8N488 228 aaPredicted RBP14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 NXPE2Q96DL1 559 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 GDAP1L1Q96MZ0 367 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 LENG8Q96PV6 779 aaPredicted RBP14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 ZDHHC6Q9H6R6 413 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 NCKIPSDQ9NZQ3 722 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 FCF1Q9Y324 198 aaKnown RBP14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 CHD5Q8TDI0 1954 aa14.67□□□□□ -0.06
HMGCS1-203ENST00000507004 TRPM6Q9BX84 2022 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 TCRBV5S1A1TA0A578 114 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 TRABD2BA6NFA1 517 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 NEMP1O14524 444 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 FPGTO14772 594 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 IGSF6O95976 241 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 PRLRP16471 622 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 ACP1P24666 158 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 ACVRL1P37023 503 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 DUSP3P51452 185 aaPredicted RBP14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 TYRO3Q06418 890 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 BNIP3Q12983 259 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 MYLK3Q32MK0 819 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 CCDC157Q569K6 752 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 SCYL2Q6P3W7 929 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 ZNF354CQ86Y25 554 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 MCOLN2Q8IZK6 566 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 CCDC185Q8N715 623 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 OR4C6Q8NH72 309 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 HCAR2Q8TDS4 363 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 RFFLQ8WZ73 363 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 EDEM3Q9BZQ6 932 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 TM6SF2Q9BZW4 377 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 SCUBE2Q9NQ36 999 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 PARVAQ9NVD7 372 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 MFHAS1Q9Y4C4 1052 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 PLXNB3Q9ULL4 1909 aa14.66□□□□□ -0.06
HMGCS1-203ENST00000507004 A0A1W2PQC6 194 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 C16orf96A6NNT2 1141 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 CCP110O43303 1012 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 BUB1O43683 1085 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 CD160O95971 181 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 DAB2P98082 770 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 CAMK2BQ13554 666 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 PTK2BQ14289 1009 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 PROX2Q3B8N5 592 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 PPP1R15BQ5SWA1 713 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 PARS2Q7L3T8 475 aaKnown RBP14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 APTXQ7Z2E3 356 aaKnown RBP14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 PHLDB2Q86SQ0 1253 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 PSTKQ8IV42 348 aaKnown RBP14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 UMODL1-AS1Q8N2C9 162 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 AOPEPQ8N6M6 819 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 TRIM11Q96F44 468 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 MCEEQ96PE7 176 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 C1QTNF2Q9BXJ5 285 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 CALN1Q9BXU9 219 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 TTYH3Q9C0H2 523 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 NRSN2Q9GZP1 204 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 GPR27Q9NS67 375 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 DKK3Q9UBP4 350 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 IPO11Q9UI26 975 aaKnown RBP14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 FZD10Q9ULW2 581 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 LHX6Q9UPM6 363 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 ZFR2Q9UPR6 939 aaKnown RBP14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 NEU3Q9UQ49 428 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 CSNK1G3Q9Y6M4 447 aa14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 ARID1BQ8NFD5 2236 aaPredicted RBP14.65□□□□□ -0.06
HMGCS1-203ENST00000507004 FAM72CH0Y354 149 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 TAF4O00268 1085 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 KRIT1O00522 736 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 PIAS2O75928 621 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 RNF8O76064 485 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 PAK4O96013 591 aaPredicted RBP14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 GZMAP12544 262 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 ATP1A3P13637 1013 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 DGKAP23743 735 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 NDST2P52849 883 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 RHOAP61586 193 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 ELP6Q0PNE2 266 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 MAPK8IP2Q13387 824 aaPredicted RBP14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 FAM72AQ5TYM5 149 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 SEL1L3Q68CR1 1132 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 FAM72DQ6L9T8 149 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 GDPD4Q6W3E5 623 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 GCNT7Q6ZNI0 430 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 Q6ZSR6 202 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 IRF2BP2Q7Z5L9 587 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 PTAR1Q7Z6K3 402 aaPredicted RBP14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 PARGQ86W56 976 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 FAM72BQ86X60 149 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 FAM181AQ8N9Y4 354 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 OR13H1Q8NG92 308 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 FNIP1Q8TF40 1166 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 BTN2A2Q8WVV5 523 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 TBATAQ96M53 351 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 CPEB1Q9BZB8 566 aaKnown RBP14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 RTN4Q9NQC3 1192 aaKnown RBP14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 NDFIP2Q9NV92 336 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 NLGN3Q9NZ94 848 aa14.64□□□□□ -0.07
HMGCS1-203ENST00000507004 SPTY2D1-AS1A0A0U1RR47 76 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 FAM170AA1A519 330 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms