RNA–Protein interactions for RNA: ENST00000506960.5

SSBP2-206, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 2

Gene SSBP2, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-206ENST00000506960 ESX1Q8N693 406 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 PRR26Q8N8Z3 221 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 SCAIQ8N9R8 606 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 NUDCD2Q8WVJ2 157 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 MED30Q96HR3 178 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 CD180Q99467 661 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 NPLQ9BXD5 320 aaPredicted RBP3.78□□□□□ -1.8
SSBP2-206ENST00000506960 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.78□□□□□ -1.8
SSBP2-206ENST00000506960 ZNF304Q9HCX3 659 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 SLC22A11Q9NSA0 550 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 GGA3Q9NZ52 723 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 IFT80Q9P2H3 777 aaPredicted RBP3.78□□□□□ -1.8
SSBP2-206ENST00000506960 TBC1D14Q9P2M4 693 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 HSF4Q9ULV5 492 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 MYO6Q9UM54 1294 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 ARHGAP26Q9UNA1 814 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 CRYL1Q9Y2S2 319 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 TOPBP1Q92547 1522 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 AQRO60306 1485 aaKnown RBP eCLIP3.78□□□□□ -1.8
SSBP2-206ENST00000506960 ADGRL1O94910 1474 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 SNAPC4Q5SXM2 1469 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 IFT140Q96RY7 1462 aa3.78□□□□□ -1.8
SSBP2-206ENST00000506960 PPRC1Q5VV67 1664 aaKnown RBP3.78□□□□□ -1.81
SSBP2-206ENST00000506960 SPATA31D1Q6ZQQ2 1576 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 DIP2BQ9P265 1576 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 CCDC196A0A1B0GTZ2 297 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 BECN2A8MW95 431 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 DHX16O60231 1041 aaKnown RBP3.77□□□□□ -1.81
SSBP2-206ENST00000506960 GAS8-AS1O95177 125 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 KLKB1P03952 638 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 FGF3P11487 239 aaPredicted RBP3.77□□□□□ -1.81
SSBP2-206ENST00000506960 CD72P21854 359 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 RFX5P48382 616 aaPredicted RBP3.77□□□□□ -1.81
SSBP2-206ENST00000506960 NFIL3Q16649 462 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 SH2D4BQ5SQS7 431 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 CAPRIN2Q6IMN6 1127 aaKnown RBP3.77□□□□□ -1.81
SSBP2-206ENST00000506960 CCDC70Q6NSX1 233 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 RETSATQ6NUM9 610 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 PDXDC1Q6P996 788 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 Q6ZTK2 550 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 BBS12Q6ZW61 710 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 ADGRG6Q86SQ4 1221 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 RBM23Q86U06 439 aaKnown RBP3.77□□□□□ -1.81
SSBP2-206ENST00000506960 CMASQ8NFW8 434 aaPredicted RBP3.77□□□□□ -1.81
SSBP2-206ENST00000506960 ELP5Q8TE02 316 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 NOC3LQ8WTT2 800 aaKnown RBP3.77□□□□□ -1.81
SSBP2-206ENST00000506960 SH3KBP1Q96B97 665 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 TBATAQ96M53 351 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 NAP1L4Q99733 375 aaKnown RBP3.77□□□□□ -1.81
SSBP2-206ENST00000506960 TTC12Q9H892 705 aaPredicted RBP3.77□□□□□ -1.81
SSBP2-206ENST00000506960 PLAC1Q9HBJ0 212 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 KRCC1Q9NPI7 259 aaPredicted RBP3.77□□□□□ -1.81
SSBP2-206ENST00000506960 PLK2Q9NYY3 685 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 CD207Q9UJ71 328 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 GAPVD1Q14C86 1478 aa3.77□□□□□ -1.81
SSBP2-206ENST00000506960 A0A1B0GVT2 93 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 OR6C68A6NDL8 312 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 GAGE12JA6NER3 117 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 SH2D7A6NKC9 451 aaPredicted RBP3.76□□□□□ -1.81
SSBP2-206ENST00000506960 INAFM1C9JVW0 142 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 GUCY1B2O75343 617 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 IL1AP01583 271 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 LCATP04180 440 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 LCKP06239 509 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 PAX3P23760 479 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 HNF1BP35680 557 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 PSMC2P35998 433 aaKnown RBP3.76□□□□□ -1.81
SSBP2-206ENST00000506960 GJC1P36383 396 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 RASSF2P50749 326 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 TMPRSS3P57727 454 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 VAMP2P63027 116 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 ROR2Q01974 943 aaKnown RBP3.76□□□□□ -1.81
SSBP2-206ENST00000506960 POU5F1BQ06416 359 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.76□□□□□ -1.81
SSBP2-206ENST00000506960 TRAF1Q13077 416 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 GPR68Q15743 365 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 WDR45BQ5MNZ6 344 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 TMEM268Q5VZI3 342 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 AADACL2Q6P093 401 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 SLC16A12Q6ZSM3 486 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 LRRC8DQ7L1W4 858 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 TMTC1Q8IUR5 882 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 SLC25A41Q8N5S1 370 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 LRRC57Q8N9N7 239 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 DNAAF1Q8NEP3 725 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 ENGASEQ8NFI3 743 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 RFWD2Q8NHY2 731 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 FAR1Q8WVX9 515 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 CNOT9Q92600 299 aaKnown RBP3.76□□□□□ -1.81
SSBP2-206ENST00000506960 HTRA1Q92743 480 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 HVCN1Q96D96 273 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 PHF21BQ96EK2 531 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 LMLNQ96KR4 655 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 EYA3Q99504 573 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 FRMD8Q9BZ67 464 aaPredicted RBP3.76□□□□□ -1.81
SSBP2-206ENST00000506960 DCLK3Q9C098 648 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 HIPK3Q9H422 1215 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 CD93Q9NPY3 652 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 WASH6PQ9NQA3 447 aa3.76□□□□□ -1.81
SSBP2-206ENST00000506960 TMEM160Q9NX00 188 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms