RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 ERP27Q96DN0 273 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 VPS39Q96JC1 886 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 SEMA3CQ99985 751 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 KCNK13Q9HB14 408 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 HAUS2Q9NVX0 235 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 SPG21Q9NZD8 308 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 TRPM5Q9NZQ8 1165 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 SLC12A4Q9UP95 1085 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 HBS1LQ9Y450 684 aaKnown RBP12.35□□□□□ -0.43
LIN54-206ENST00000506560 TCAF1Q9Y4C2 921 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 MYOFQ9NZM1 2061 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 A0A0U1RQS6 177 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 OR51F1A6NGY5 319 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 ZBBXA8MT70 800 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 ITM2AO43736 263 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 FSBPO95073 299 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 URODP06132 367 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 LINC00271P0C7V0 271 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 HARS2P49590 506 aaKnown RBP12.35□□□□□ -0.43
LIN54-206ENST00000506560 TMPRSS15P98073 1019 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 LBRQ14739 615 aaKnown RBP12.35□□□□□ -0.43
LIN54-206ENST00000506560 PTPRRQ15256 657 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 ANO4Q32M45 955 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 KIF2BQ8N4N8 673 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 ARL14EPQ8N8R7 260 aaPredicted RBP12.35□□□□□ -0.43
LIN54-206ENST00000506560 ZFRQ96KR1 1074 aaKnown RBP12.35□□□□□ -0.43
LIN54-206ENST00000506560 PDFQ9HBH1 243 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 SLC39A10Q9ULF5 831 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 INSL5Q9Y5Q6 135 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 PLIN3O60664 434 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 PRAMEF11O60813 436 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 BPGMP07738 259 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 CNPP09543 421 aaKnown RBP12.35□□□□□ -0.43
LIN54-206ENST00000506560 ARSDP51689 593 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 CYP4F8P98187 520 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 GALNT3Q14435 633 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 GALNTL6Q49A17 601 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 FSCBQ5H9T9 825 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 STXBP5Q5T5C0 1151 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 GRTP1Q5TC63 336 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 SNX30Q5VWJ9 437 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 IL31Q6EBC2 164 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 LINGO4Q6UY18 593 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 NUDCD3Q8IVD9 361 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 HS6ST3Q8IZP7 471 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 TEX26Q8N6G2 289 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 ADAMTS19Q8TE59 1207 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 MYRFLQ96LU7 910 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 ENTPD7Q9NQZ7 604 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 TREX1Q9NSU2 369 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 COMMD8Q9NX08 183 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 MKS1Q9NXB0 559 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 SIRPGQ9P1W8 387 aa12.35□□□□□ -0.43
LIN54-206ENST00000506560 REV3LO60673 3130 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 SLC1A2P43004 574 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 GNA12Q03113 381 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 RAB33AQ14088 237 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 PCLAFQ15004 111 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 FASTKD1Q53R41 847 aaKnown RBP12.34□□□□□ -0.43
LIN54-206ENST00000506560 RNF43Q68DV7 783 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 ZC3HC1Q86WB0 502 aaKnown RBP12.34□□□□□ -0.43
LIN54-206ENST00000506560 WFDC5Q8TCV5 224 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 E2F7Q96AV8 911 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 HERC2P3Q9BVR0 1158 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 KLF16Q9BXK1 252 aaPredicted RBP12.34□□□□□ -0.43
LIN54-206ENST00000506560 IL21Q9HBE4 155 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 ATP13A1Q9HD20 1204 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 FBXO6Q9NRD1 293 aaPredicted RBP12.34□□□□□ -0.43
LIN54-206ENST00000506560 A0A096LPK6 155 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 SNAP91O60641 907 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 C2P06681 752 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 ATXN1LP0C7T5 689 aaKnown RBP12.34□□□□□ -0.43
LIN54-206ENST00000506560 MBL2P11226 248 aaPredicted RBP12.34□□□□□ -0.43
LIN54-206ENST00000506560 CNTFP26441 200 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 ALDH3A1P30838 453 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 NCALDP61601 193 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 IL10RBQ08334 325 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 SIRPB2Q5JXA9 342 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 NLRP9Q7RTR0 991 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 DDX53Q86TM3 631 aaKnown RBP12.34□□□□□ -0.43
LIN54-206ENST00000506560 LRRC49Q8IUZ0 686 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 SLC41A1Q8IVJ1 513 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 C10orf107Q8IVU9 208 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 SH3RF2Q8TEC5 729 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 GRAMD1AQ96CP6 724 aa12.34□□□□□ -0.43
LIN54-206ENST00000506560 OXCT2Q9BYC2 517 aaPredicted RBP12.34□□□□□ -0.43
LIN54-206ENST00000506560 SUDS3Q9H7L9 328 aaPredicted RBP12.34□□□□□ -0.43
LIN54-206ENST00000506560 OBSL1O75147 1896 aa12.33□□□□□ -0.43
LIN54-206ENST00000506560 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 MAGEB16A2A368 324 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 LCHNA4D1U4 455 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 FGF18O76093 207 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 PROCP04070 461 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 SPRP35270 261 aaPredicted RBP12.33□□□□□ -0.44
LIN54-206ENST00000506560 MAGEA12P43365 314 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 SLC11A2P49281 568 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 KCNJ2P63252 427 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 PARP15Q460N3 678 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 TPGS2Q68CL5 300 aa12.33□□□□□ -0.44
LIN54-206ENST00000506560 ZNF470Q6ECI4 717 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms