RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 GPATCH4Q5T3I0 446 aaKnown RBP6.33□□□□□ -1.4
HERC4-213ENST00000506515 AAGABQ6PD74 315 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 C17orf99Q6UX52 265 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 IL20RBQ6UXL0 311 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 ZNF793Q6ZN11 406 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 IGFN1Q86VF2 1251 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 WDR5BQ86VZ2 330 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 PRIMA1Q86XR5 153 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 CMASQ8NFW8 434 aaPredicted RBP6.33□□□□□ -1.4
HERC4-213ENST00000506515 SIGLEC11Q96RL6 698 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 PCDHB16Q9NRJ7 776 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 ATP8A2Q9NTI2 1148 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 TAS2R10Q9NYW0 307 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 GRHL1Q9NZI5 618 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 FLRT1Q9NZU1 646 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 KCND2Q9NZV8 630 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 A2MP01023 1474 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 CCDC18Q5T9S5 1454 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 SIGLEC1Q9BZZ2 1709 aa6.33□□□□□ -1.4
HERC4-213ENST00000506515 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.32□□□□□ -1.4
HERC4-213ENST00000506515 A0A087X0M5 115 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 A0A1B0GX30 115 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 KCNU1A8MYU2 1149 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 BCAR3O75815 825 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 LCKP06239 509 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 CTSAP10619 480 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 UBL4AP11441 157 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 COX7A2P14406 83 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 EPHA8P29322 1005 aaPredicted RBP6.32□□□□□ -1.4
HERC4-213ENST00000506515 DAZAP2Q15038 168 aaPredicted RBP6.32□□□□□ -1.4
HERC4-213ENST00000506515 RPE65Q16518 533 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 SYTL3Q4VX76 610 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 SLC9B1Q4ZJI4 515 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 ENTPD8Q5MY95 495 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 PAPD7Q5XG87 772 aaKnown RBP6.32□□□□□ -1.4
HERC4-213ENST00000506515 ISM2Q6H9L7 571 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 TMEM81Q6P7N7 255 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 MOB3CQ70IA8 216 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 RRM2BQ7LG56 351 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 PRSS45Q7RTY3 260 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 UBE2Q1Q7Z7E8 422 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 CNTROBQ8N137 903 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 IGFBPL1Q8WX77 278 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 CUL5Q93034 780 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 EME1Q96AY2 570 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 TUBB6Q9BUF5 446 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 HEMGNQ9BXL5 484 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 SEMA4CQ9C0C4 833 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 BABAM1Q9NWV8 329 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 MED14O60244 1454 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 NLRP1Q9C000 1473 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 RTEL1-TNFRSF6BF6WH68 1400 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 NPHP4O75161 1426 aaPredicted RBP6.32□□□□□ -1.4
HERC4-213ENST00000506515 FAM135BQ49AJ0 1406 aa6.32□□□□□ -1.4
HERC4-213ENST00000506515 ZNF142P52746 1687 aaPredicted RBP6.31□□□□□ -1.4
HERC4-213ENST00000506515 ADAM10O14672 748 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 PRPF4O43172 522 aaKnown RBP eCLIP6.31□□□□□ -1.4
HERC4-213ENST00000506515 TNFSF14O43557 240 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 TMCC1O94876 653 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 TMEM63AO94886 807 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 HOXD9P28356 352 aaPredicted RBP6.31□□□□□ -1.4
HERC4-213ENST00000506515 ARSFP54793 590 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 ID2Q02363 134 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 NEXNQ0ZGT2 675 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 TBCEQ15813 527 aaPredicted RBP6.31□□□□□ -1.4
HERC4-213ENST00000506515 ME3Q16798 604 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 TTC39AQ5SRH9 613 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 KIAA1614Q5VZ46 1190 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 HMBOX1Q6NT76 420 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 SLC2A7Q6PXP3 512 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 C4orf50Q6ZRC1 276 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 CPLX4Q7Z7G2 160 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 DIS3L2Q8IYB7 885 aaKnown RBP6.31□□□□□ -1.4
HERC4-213ENST00000506515 DPP10Q8N608 796 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 ANKRD52Q8NB46 1076 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 METTL6Q8TCB7 284 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 WIPF2Q8TF74 440 aaPredicted RBP6.31□□□□□ -1.4
HERC4-213ENST00000506515 GDPD5Q8WTR4 605 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 CLMNQ96JQ2 1002 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 KLHL15Q96M94 604 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 KRT84Q9NSB2 600 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 BLOC1S4Q9NUP1 217 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 PLEKHB1Q9UF11 243 aaPredicted RBP6.31□□□□□ -1.4
HERC4-213ENST00000506515 FBXO40Q9UH90 709 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 AGO2Q9UKV8 859 aaKnown RBP6.31□□□□□ -1.4
HERC4-213ENST00000506515 CLDN16Q9Y5I7 305 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 MST1RQ04912 1400 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 MIA2Q96PC5 1412 aa6.31□□□□□ -1.4
HERC4-213ENST00000506515 DHX29Q7Z478 1369 aaKnown RBP6.31□□□□□ -1.4
HERC4-213ENST00000506515 KIR2DS5A0A0G2JLQ3 304 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 ARHGAP10A1A4S6 786 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 DDTLA6NHG4 134 aaPredicted RBP6.3□□□□□ -1.4
HERC4-213ENST00000506515 KIR2DS3K7RE56 304 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 SLC25A17O43808 307 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 TACC1O75410 805 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 GALTP07902 379 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 CYP19A1P11511 503 aaPredicted RBP6.3□□□□□ -1.4
HERC4-213ENST00000506515 FMO4P31512 558 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 SLC16A2P36021 539 aa6.3□□□□□ -1.4
HERC4-213ENST00000506515 CASP2P42575 452 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms