RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 USP33Q8TEY7 942 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 FRS2Q8WU20 508 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 UCMAQ8WVF2 138 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 SNRNP27Q8WVK2 155 aaKnown RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 UBXN4Q92575 508 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 EZH1Q92800 747 aaPredicted RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 VOPP1Q96AW1 172 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 LRRC45Q96CN5 670 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 IMP4Q96G21 291 aaKnown RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 SNF8Q96H20 258 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 RPL10LQ96L21 214 aaKnown RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 AGAP3Q96P47 875 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 NUDCD1Q96RS6 583 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 GORASP1Q9BQQ3 440 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 CPEB1Q9BZB8 566 aaKnown RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 POLR1EQ9GZS1 481 aaKnown RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 SLC25A51Q9H1U9 297 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 TMEM245Q9H330 911 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 ANKZF1Q9H8Y5 726 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 ETNK1Q9HBU6 452 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 NT5MQ9NPB1 228 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 GDF3Q9NR23 364 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 FAM114A2Q9NRY5 505 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 SEPT10Q9P0V9 454 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 KLHL8Q9P2G9 620 aaPredicted RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 SLCO3A1Q9UIG8 710 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 HCN2Q9UL51 889 aa7.31□□□□□ -1.24
NUP54-204ENST00000506098 FARP1Q9Y4F1 1045 aaPredicted RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 TNRC6BQ9UPQ9 1833 aaKnown RBP7.31□□□□□ -1.24
NUP54-204ENST00000506098 RALGAPA1Q6GYQ0 2036 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 ERI2A8K979 691 aaKnown RBP7.3□□□□□ -1.24
NUP54-204ENST00000506098 WASH3PC4AMC7 463 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 K7ERQ8 282 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 ANXA9O76027 345 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 SUN1O94901 812 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 SEC31AO94979 1220 aaKnown RBP7.3□□□□□ -1.24
NUP54-204ENST00000506098 RHOXF2BP0C7M4 288 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 C7P10643 843 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 NFKB1P19838 968 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 TPSB2P20231 275 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 PSMB4P28070 264 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 ADCY8P40145 1251 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 RGRP47804 291 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 NUMBP49757 651 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 GEMP55040 296 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 STARD6P59095 220 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 SNRPD1P62314 119 aaKnown RBP7.3□□□□□ -1.24
NUP54-204ENST00000506098 MRPS25P82663 173 aaKnown RBP7.3□□□□□ -1.24
NUP54-204ENST00000506098 MRPS21P82921 87 aaKnown RBP7.3□□□□□ -1.24
NUP54-204ENST00000506098 CDK16Q00536 496 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 GUCY2DQ02846 1103 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 CAV1Q03135 178 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 NIPAL4Q0D2K0 466 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 MPP3Q13368 585 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 CCINQ13939 588 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 ZNF234Q14588 700 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 IHHQ14623 411 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 KCNJ11Q14654 390 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 PON2Q15165 354 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 TRIP13Q15645 432 aaPredicted RBP7.3□□□□□ -1.24
NUP54-204ENST00000506098 TPSAB1Q15661 275 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 DLG2Q15700 870 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 ERCC6LQ2NKX8 1250 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 FBXO43Q4G163 708 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 DGKKQ5KSL6 1271 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 FAM182AQ5T1J6 154 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 SWT1Q5T5J6 900 aaKnown RBP7.3□□□□□ -1.24
NUP54-204ENST00000506098 RNASEH2BQ5TBB1 312 aaKnown RBP7.3□□□□□ -1.24
NUP54-204ENST00000506098 FSTL4Q6MZW2 842 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 HIBCHQ6NVY1 386 aaPredicted RBP7.3□□□□□ -1.24
NUP54-204ENST00000506098 WDR93Q6P2C0 686 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 C22orf39Q6P5X5 142 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 NCEH1Q6PIU2 408 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 LEKR1Q6ZMV7 388 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 SRLQ86TD4 932 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 PRPF39Q86UA1 669 aaKnown RBP7.3□□□□□ -1.24
NUP54-204ENST00000506098 HOOK3Q86VS8 718 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 SFTPA1Q8IWL2 248 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 PPIL6Q8IXY8 311 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 IFT20Q8IY31 132 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 ZNF687Q8N1G0 1237 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 NAT8LQ8N9F0 302 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 ATP11CQ8NB49 1132 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 BBOF1Q8ND07 529 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 OR2AP1Q8NGE2 309 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 CYB5D2Q8WUJ1 264 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 FAM3CQ92520 227 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 CPT1BQ92523 772 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 SPOCK2Q92563 424 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 PTPRN2Q92932 1015 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 ART4Q93070 314 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 NSMCE3Q96MG7 304 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 RHOXF2Q9BQY4 288 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 CINPQ9BW66 212 aaPredicted RBP7.3□□□□□ -1.24
NUP54-204ENST00000506098 CEP41Q9BYV8 373 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 CIPCQ9C0C6 399 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 EPB41L5Q9HCM4 733 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 EIF2B3Q9NR50 452 aaKnown RBP7.3□□□□□ -1.24
NUP54-204ENST00000506098 RAB6BQ9NRW1 208 aa7.3□□□□□ -1.24
NUP54-204ENST00000506098 VPS45Q9NRW7 570 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms