RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 ZCCHC8Q6NZY4 707 aaKnown RBP10.53□□□□□ -0.72
BRIX1-202ENST00000506023 CLEC14AQ86T13 490 aa10.53□□□□□ -0.72
BRIX1-202ENST00000506023 PARGQ86W56 976 aa10.53□□□□□ -0.72
BRIX1-202ENST00000506023 IRF2BP1Q8IU81 584 aa10.53□□□□□ -0.72
BRIX1-202ENST00000506023 SFTPA2Q8IWL1 248 aa10.53□□□□□ -0.72
BRIX1-202ENST00000506023 LMX1AQ8TE12 382 aa10.53□□□□□ -0.72
BRIX1-202ENST00000506023 SHC3Q92529 594 aa10.53□□□□□ -0.72
BRIX1-202ENST00000506023 RNF34Q969K3 372 aa10.53□□□□□ -0.72
BRIX1-202ENST00000506023 LRRC61Q9BV99 259 aa10.53□□□□□ -0.72
BRIX1-202ENST00000506023 C1QTNF2Q9BXJ5 285 aa10.53□□□□□ -0.72
BRIX1-202ENST00000506023 TRIM4Q9C037 500 aa10.53□□□□□ -0.72
BRIX1-202ENST00000506023 PCDHGC3Q9UN70 934 aa10.53□□□□□ -0.72
BRIX1-202ENST00000506023 NEU3Q9UQ49 428 aa10.53□□□□□ -0.72
BRIX1-202ENST00000506023 BIN1O00499 593 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 MUSKO15146 869 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 AQP9O43315 295 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 PRNPP04156 253 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 SLC2A3P11169 496 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 HGFP14210 728 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 JUNDP17535 347 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 WT1P19544 449 aaPredicted RBP10.52□□□□□ -0.73
BRIX1-202ENST00000506023 ITGB7P26010 798 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 L1CAMP32004 1257 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 NOS2P35228 1153 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 FLT3P36888 993 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 ACVRL1P37023 503 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 SULT1E1P49888 294 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 SERPINH1P50454 418 aaKnown RBP10.52□□□□□ -0.73
BRIX1-202ENST00000506023 NEK3P51956 506 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 OXCT1P55809 520 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 HNRNPKP61978 463 aaKnown RBP eCLIP10.52□□□□□ -0.73
BRIX1-202ENST00000506023 TCEA2Q15560 299 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 EFHC1Q5JVL4 640 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 FOXR1Q6PIV2 292 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 C11orf57Q6ZUT1 292 aaPredicted RBP10.52□□□□□ -0.73
BRIX1-202ENST00000506023 SLC47A2Q86VL8 602 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 LSMEM2Q8N112 164 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 ZNF397Q8NF99 534 aaPredicted RBP10.52□□□□□ -0.73
BRIX1-202ENST00000506023 CENPTQ96BT3 561 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 MED8Q96G25 268 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 TRIM62Q9BVG3 475 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 SRRTQ9BXP5 876 aaKnown RBP10.52□□□□□ -0.73
BRIX1-202ENST00000506023 DPH1Q9BZG8 443 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 TM6SF2Q9BZW4 377 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 MBNL1Q9NR56 388 aaKnown RBP10.52□□□□□ -0.73
BRIX1-202ENST00000506023 THSD1Q9NS62 852 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 SLC12A6Q9UHW9 1150 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 PCDHGA8Q9Y5G5 932 aa10.52□□□□□ -0.73
BRIX1-202ENST00000506023 A0A1W2PQM1 296 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 NTN3O00634 580 aaPredicted RBP10.51□□□□□ -0.73
BRIX1-202ENST00000506023 MED7O43513 233 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 SLC28A2O43868 658 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 TNFSF15O95150 251 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 SMC2O95347 1197 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 ALPPL2P10696 532 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 ITGB6P18564 788 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 USP8P40818 1118 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 UCNP55089 124 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 ADKP55263 362 aaKnown RBP10.51□□□□□ -0.73
BRIX1-202ENST00000506023 RNASE9P60153 205 aaKnown RBP10.51□□□□□ -0.73
BRIX1-202ENST00000506023 ARL13BQ3SXY8 428 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 BROXQ5VW32 411 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 KIAA1161Q6NSJ0 714 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 FOXR2Q6PJQ5 311 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 LEKR1Q6ZMV7 388 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 RBM44Q6ZP01 1051 aaKnown RBP10.51□□□□□ -0.73
BRIX1-202ENST00000506023 SETD3Q86TU7 594 aaPredicted RBP10.51□□□□□ -0.73
BRIX1-202ENST00000506023 PGAP3Q96FM1 320 aaPredicted RBP10.51□□□□□ -0.73
BRIX1-202ENST00000506023 TIGD1Q96MW7 591 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 CCDC3Q9BQI4 270 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 C2orf49Q9BVC5 232 aaPredicted RBP10.51□□□□□ -0.73
BRIX1-202ENST00000506023 DUSP23Q9BVJ7 150 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 ABCG4Q9H172 646 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 CLMPQ9H6B4 373 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 ZDHHC6Q9H6R6 413 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 USP29Q9HBJ7 922 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 SALL4Q9UJQ4 1053 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.51□□□□□ -0.73
BRIX1-202ENST00000506023 CSNK1G3Q9Y6M4 447 aa10.51□□□□□ -0.73
BRIX1-202ENST00000506023 NEMP2A6NFY4 417 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 C16orf96A6NNT2 1141 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 FAM72CH0Y354 149 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 AGRPO00253 132 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 FOXN3O00409 490 aaPredicted RBP10.5□□□□□ -0.73
BRIX1-202ENST00000506023 AREL1O15033 823 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 YY2O15391 372 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 AP1G1O43747 822 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 WISP1O95388 367 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 TSHRP16473 764 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 PON1P27169 355 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 RABIFP47224 123 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 DUSP3P51452 185 aaPredicted RBP10.5□□□□□ -0.73
BRIX1-202ENST00000506023 RPS21P63220 83 aaKnown RBP10.5□□□□□ -0.73
BRIX1-202ENST00000506023 KRT83P78385 493 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 ZSCAN23Q3MJ62 389 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 CARD16Q5EG05 197 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 PRRT3Q5FWE3 981 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 C6orf132Q5T0Z8 1188 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 FAM72AQ5TYM5 149 aa10.5□□□□□ -0.73
BRIX1-202ENST00000506023 MANEALQ5VSG8 457 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms