RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 HCN3Q9P1Z3 774 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 SQORQ9Y6N5 450 aa4.29□□□□□ -1.72
TOPBP1-204ENST00000505804 A0A096LPK6 155 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 GAGE12JA6NER3 117 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 J3KRW8 73 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 SPTLC2O15270 562 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 ENO3P13929 434 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 POLD2P49005 469 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 CASP6P55212 293 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 CYP4A11Q02928 519 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 PPATQ06203 517 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 LAMB3Q13751 1172 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 DUSP6Q16828 381 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 FAM160B2Q86V87 743 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 TMC8Q8IU68 726 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 CADM3Q8N126 398 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 GABPB2Q8TAK5 448 aaPredicted RBP4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 NOC3LQ8WTT2 800 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 KIF1BPQ96EK5 621 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 FCRL4Q96PJ5 515 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 NAP1L4Q99733 375 aaKnown RBP4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 MVB12BQ9H7P6 319 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 VEZTQ9HBM0 779 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 SNTG1Q9NSN8 517 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 NAALADL1Q9UQQ1 740 aa4.28□□□□□ -1.72
TOPBP1-204ENST00000505804 BECN2A8MW95 431 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 I6L893 689 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 TACC1O75410 805 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 CLDN7O95471 211 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 F9P00740 461 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 MYZAPP0CAP1 466 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 COX7A2P14406 83 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 TBXAS1P24557 533 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 ELF1P32519 619 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 GPR12P47775 334 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 CENPAP49450 140 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 RASSF2P50749 326 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 BLKP51451 505 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 CDH12P55289 794 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 P2RX3P56373 397 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 SELENOVP59797 346 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 CAPSQ13938 189 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 TWIST1Q15672 202 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 PRICKLE4Q2TBC4 344 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 SLC9B1Q4ZJI4 515 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 DCAF12L2Q5VW00 463 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 TMEM81Q6P7N7 255 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 H1FNTQ75WM6 255 aaPredicted RBP4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 TADA2BQ86TJ2 420 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 ARMC8Q8IUR7 673 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 LURAP1LQ8IV03 231 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 C7orf57Q8NEG2 295 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 SCARB1Q8WTV0 552 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 TMEM170AQ8WVE7 144 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 MPP4Q96JB8 637 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 YME1L1Q96TA2 773 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 USP44Q9H0E7 712 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 KLHL31Q9H511 634 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 PPP1R14DQ9NXH3 145 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 CTNNAL1Q9UBT7 734 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 CAMK2AQ9UQM7 478 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 TMEM98Q9Y2Y6 226 aa4.27□□□□□ -1.73
TOPBP1-204ENST00000505804 TEX13CA0A0J9YWL9 993 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 B4DGG1 531 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 INO80B-WBP1J3KQ70 363 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 EPB41L2O43491 1005 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 CRYABP02511 175 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 CYP1A2P05177 515 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 GALTP07902 379 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 HOXB2P14652 356 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 SLC2A4P14672 509 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 CTPS1P17812 591 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 EDN2P20800 178 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 FMO4P31512 558 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 TTKP33981 857 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 KRT9P35527 623 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 RFX5P48382 616 aaPredicted RBP4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 CLCN5P51795 746 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 YWHAZP63104 245 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 MPP1Q00013 466 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 TRAF1Q13077 416 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 GPR18Q14330 331 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 ZNF260Q3ZCT1 412 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 Q6ZTK2 550 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 R3HCC1LQ7Z5L2 792 aaKnown RBP4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 GPAT4Q86UL3 456 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 KIAA2013Q8IYS2 634 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 RBFAQ8N0V3 343 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 PCYOX1LQ8NBM8 494 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 MCPH1Q8NEM0 835 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 ZMIZ2Q8NF64 920 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 BICD2Q8TD16 824 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 SLC35F5Q8WV83 523 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 URB1-AS1Q96HZ7 61 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 KLHL15Q96M94 604 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 NPFFR1Q9GZQ6 430 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 FAM234AQ9H0X4 552 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 SLC25A18Q9H1K4 315 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 PCDHB16Q9NRJ7 776 aa4.26□□□□□ -1.73
TOPBP1-204ENST00000505804 KIAA1456Q9P272 454 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms