RNA–Protein interactions for RNA: ENST00000504824.5

SDHA-205, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5

Gene SDHA, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-205ENST00000504824 WASF2Q9Y6W5 498 aa17.59■□□□□ 0.41
SDHA-205ENST00000504824 APC2O95996 2303 aa17.59■□□□□ 0.41
SDHA-205ENST00000504824 PLXNB3Q9ULL4 1909 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 A0A1W2PR77 199 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 WASH4PA8MWX3 477 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 TAF4O00268 1085 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 BUB1O43683 1085 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 MAGEC1O60732 1142 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 MYBL1P10243 752 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 CCNHP51946 323 aaPredicted RBP17.58■□□□□ 0.41
SDHA-205ENST00000504824 YBEYP58557 167 aaPredicted RBP17.58■□□□□ 0.41
SDHA-205ENST00000504824 ERMARDQ5T6L9 678 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 HGSNATQ68CP4 663 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 NAPEPLDQ6IQ20 393 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 NEK5Q6P3R8 708 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 GATAD2AQ86YP4 633 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 RYBPQ8N488 228 aaPredicted RBP17.58■□□□□ 0.41
SDHA-205ENST00000504824 ARFGAP1Q8N6T3 406 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 FNIP1Q8TF40 1166 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 TM6SF2Q9BZW4 377 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 TRIM7Q9C029 511 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 GPATCH2LQ9NWQ4 482 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 LUC7L2Q9Y383 392 aaKnown RBP17.58■□□□□ 0.41
SDHA-205ENST00000504824 SCINQ9Y6U3 715 aa17.58■□□□□ 0.41
SDHA-205ENST00000504824 CHD5Q8TDI0 1954 aa17.58■□□□□ 0.4
SDHA-205ENST00000504824 ZFHX4Q86UP3 3567 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 ZSCAN5CA6NGD5 496 aaPredicted RBP17.57■□□□□ 0.4
SDHA-205ENST00000504824 TLR4O00206 839 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 FGF10O15520 208 aaPredicted RBP17.57■□□□□ 0.4
SDHA-205ENST00000504824 RNGTTO60942 597 aaKnown RBP17.57■□□□□ 0.4
SDHA-205ENST00000504824 DKK1O94907 266 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 SERPING1P05155 500 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 CDK4P11802 303 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 HTR7P34969 479 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 TPI1P60174 286 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 STAT4Q14765 748 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 SETMARQ53H47 684 aaPredicted RBP17.57■□□□□ 0.4
SDHA-205ENST00000504824 PRAMEF14Q5SWL7 426 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 VPS36Q86VN1 386 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 UMODL1-AS1Q8N2C9 162 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 MFSD2AQ8NA29 543 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 DHX35Q9H5Z1 703 aaKnown RBP17.57■□□□□ 0.4
SDHA-205ENST00000504824 DONSONQ9NYP3 566 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 AP4E1Q9UPM8 1137 aa17.57■□□□□ 0.4
SDHA-205ENST00000504824 A0A1W2PQU0 124 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 EIF3CLB5ME19 914 aaKnown RBP17.56■□□□□ 0.4
SDHA-205ENST00000504824 RASA4BC9J798 803 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 PRAMEF26H0Y7S4 382 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 ENC1O14682 589 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 RASA4O43374 803 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 PRPSAP2O60256 369 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 PCDH8O95206 1070 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 LDOC1O95751 146 aaPredicted RBP17.56■□□□□ 0.4
SDHA-205ENST00000504824 CAPNS1P04632 268 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 ITGB7P26010 798 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 MIPP30301 263 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 HNF1BP35680 557 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 SNRPD1P62314 119 aaKnown RBP17.56■□□□□ 0.4
SDHA-205ENST00000504824 PARP15Q460N3 678 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 FBXL19Q6PCT2 694 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 C19orf48Q6RUI8 117 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 DHRS13Q6UX07 377 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 OR2AP1Q8NGE2 309 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 HMCESQ96FZ2 354 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 LRIG1Q96JA1 1093 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 CNDP2Q96KP4 475 aaKnown RBP17.56■□□□□ 0.4
SDHA-205ENST00000504824 EIF3CQ99613 913 aaKnown RBP17.56■□□□□ 0.4
SDHA-205ENST00000504824 NCAPGQ9BPX3 1015 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 KLC2Q9H0B6 622 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 ZDHHC6Q9H6R6 413 aa17.56■□□□□ 0.4
SDHA-205ENST00000504824 POP4O95707 220 aaKnown RBP17.55■□□□□ 0.4
SDHA-205ENST00000504824 GSRP00390 522 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 TPM3P06753 285 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 EPHA8P29322 1005 aaPredicted RBP17.55■□□□□ 0.4
SDHA-205ENST00000504824 GKP32189 559 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 NEK3P51956 506 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 NXPH1P58417 271 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 SERINC3Q13530 473 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 NFKBIBQ15653 356 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 SMAD1Q15797 465 aaKnown RBP17.55■□□□□ 0.4
SDHA-205ENST00000504824 CA9Q16790 459 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 MYLK3Q32MK0 819 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 INO80DQ53TQ3 878 aaPredicted RBP17.55■□□□□ 0.4
SDHA-205ENST00000504824 HORMAD1Q86X24 394 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 PDCD7Q8N8D1 485 aaKnown RBP17.55■□□□□ 0.4
SDHA-205ENST00000504824 OR6K2Q8NGY2 324 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 CASKIN2Q8WXE0 1202 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 KLK6Q92876 244 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 PEBP4Q96S96 227 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 SNRNP25Q9BV90 132 aaKnown RBP17.55■□□□□ 0.4
SDHA-205ENST00000504824 GPSM3Q9Y4H4 160 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 PCDHGA1Q9Y5H4 931 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.55■□□□□ 0.48e-7■□□□□ 9.2
SDHA-205ENST00000504824 DOCK9Q9BZ29 2069 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 ZZEF1O43149 2961 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 COL5A1P20908 1838 aaPredicted RBP17.55■□□□□ 0.4
SDHA-205ENST00000504824 FAM149AA5PLN7 773 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 TRABD2BA6NFA1 517 aa17.55■□□□□ 0.4
SDHA-205ENST00000504824 EEF2KO00418 725 aaKnown RBP17.55■□□□□ 0.4
SDHA-205ENST00000504824 KRIT1O00522 736 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms