RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 RTP5Q14D33 572 aa13.4□□□□□ -0.26
DDX41-204ENST00000504807 FKBP15Q5T1M5 1219 aa13.4□□□□□ -0.26
DDX41-204ENST00000504807 LRRC31Q6UY01 552 aa13.4□□□□□ -0.26
DDX41-204ENST00000504807 IRF2BP2Q7Z5L9 587 aa13.4□□□□□ -0.26
DDX41-204ENST00000504807 PHF13Q86YI8 300 aaPredicted RBP13.4□□□□□ -0.26
DDX41-204ENST00000504807 OR6K2Q8NGY2 324 aa13.4□□□□□ -0.26
DDX41-204ENST00000504807 ARHGEF2Q92974 986 aaKnown RBP13.4□□□□□ -0.26
DDX41-204ENST00000504807 MED8Q96G25 268 aa13.4□□□□□ -0.26
DDX41-204ENST00000504807 NRSN2Q9GZP1 204 aa13.4□□□□□ -0.26
DDX41-204ENST00000504807 ATP13A1Q9HD20 1204 aa13.4□□□□□ -0.26
DDX41-204ENST00000504807 ANO10Q9NW15 660 aa13.4□□□□□ -0.26
DDX41-204ENST00000504807 PPARGC1AQ9UBK2 798 aaKnown RBP13.4□□□□□ -0.26
DDX41-204ENST00000504807 OR12D3Q9UGF7 316 aa13.4□□□□□ -0.26
DDX41-204ENST00000504807 DNAI1Q9UI46 699 aa13.4□□□□□ -0.26
DDX41-204ENST00000504807 LRRK2Q5S007 2527 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 C1QTNF3-AMACRE9PGA6 284 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 SLC31A1O15431 190 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 SDC3O75056 442 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 SDC4P31431 198 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 ACTN2P35609 894 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 ABL2P42684 1182 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 TMPRSS3P57727 454 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 CLDN2P57739 230 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 NRG1Q02297 640 aaPredicted RBP13.39□□□□□ -0.27
DDX41-204ENST00000504807 TMEM259Q4ZIN3 620 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 TPRG1LQ5T0D9 272 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 CCDC183Q5T5S1 534 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 HES3Q5TGS1 186 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 SFMBT2Q5VUG0 894 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 SASS6Q6UVJ0 657 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 GCNT7Q6ZNI0 430 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 PARS2Q7L3T8 475 aaKnown RBP13.39□□□□□ -0.27
DDX41-204ENST00000504807 STRADAQ7RTN6 431 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 DSG4Q86SJ6 1040 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 SLC22A18ASQ8N1D0 253 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 EID2Q8N6I1 236 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 ARFGAP1Q8N6T3 406 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 TMIEQ8NEW7 156 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 NEK11Q8NG66 645 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 TTC9Q92623 222 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 AGPAT1Q99943 283 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 TM6SF2Q9BZW4 377 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 TRIM7Q9C029 511 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 UCKL1Q9NWZ5 548 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 ADAM22Q9P0K1 906 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 ANKMY1Q9P2S6 941 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 IL36AQ9UHA7 158 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 ITM2BQ9Y287 266 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 HEMK1Q9Y5R4 338 aaPredicted RBP13.39□□□□□ -0.27
DDX41-204ENST00000504807 NBPF19A0A087WUL8 3843 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 CABIN1Q9Y6J0 2220 aa13.39□□□□□ -0.27
DDX41-204ENST00000504807 ATMINO43313 823 aaPredicted RBP13.38□□□□□ -0.27
DDX41-204ENST00000504807 PLEKP08567 350 aaPredicted RBP13.38□□□□□ -0.27
DDX41-204ENST00000504807 GIMD1P0DJR0 217 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 KRT3P12035 628 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 ITIH2P19823 946 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 CLCN6P51797 869 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 CCNHP51946 323 aaPredicted RBP13.38□□□□□ -0.27
DDX41-204ENST00000504807 ANO6Q4KMQ2 910 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 ATXN7L2Q5T6C5 722 aaPredicted RBP13.38□□□□□ -0.27
DDX41-204ENST00000504807 BROXQ5VW32 411 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 FAM46CQ5VWP2 391 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 RWDD4Q6NW29 188 aaKnown RBP13.38□□□□□ -0.27
DDX41-204ENST00000504807 TRIM72Q6ZMU5 477 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 MFSD2AQ8NA29 543 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 C3orf20Q8ND61 904 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 OR13H1Q8NG92 308 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 PCMTD1Q96MG8 357 aaPredicted RBP13.38□□□□□ -0.27
DDX41-204ENST00000504807 MCEEQ96PE7 176 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 GBP4Q96PP9 640 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 OSBPL2Q9H1P3 480 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 KDM4CQ9H3R0 1056 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 PREBQ9HCU5 417 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 GDF3Q9NR23 364 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 TMEM248Q9NWD8 314 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 GPATCH2LQ9NWQ4 482 aa13.38□□□□□ -0.27
DDX41-204ENST00000504807 SIGLEC16A6NMB1 481 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 RHOQP17081 205 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 GPD1P21695 349 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 NSFP46459 744 aaKnown RBP13.37□□□□□ -0.27
DDX41-204ENST00000504807 RXRGP48443 463 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 ACADVLP49748 655 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 DNA2P51530 1060 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 SFSWAPQ12872 951 aaKnown RBP13.37□□□□□ -0.27
DDX41-204ENST00000504807 NFATC3Q12968 1075 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 CA9Q16790 459 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 TBC1D25Q3MII6 688 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 CARD16Q5EG05 197 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 LRRC73Q5JTD7 316 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 ZNF783Q6ZMS7 281 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 CYP4V2Q6ZWL3 525 aaPredicted RBP13.37□□□□□ -0.27
DDX41-204ENST00000504807 ERN2Q76MJ5 926 aaKnown RBP13.37□□□□□ -0.27
DDX41-204ENST00000504807 PRPF39Q86UA1 669 aaKnown RBP13.37□□□□□ -0.27
DDX41-204ENST00000504807 MCOLN2Q8IZK6 566 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 SLC25A45Q8N413 288 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 MSANTD4Q8NCY6 345 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 TSC1Q92574 1164 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 NTAN1Q96AB6 310 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 BMFQ96LC9 184 aa13.37□□□□□ -0.27
DDX41-204ENST00000504807 NAP1L5Q96NT1 182 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms