RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 TNFRSF12AQ9NP84 129 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 DUS2Q9NX74 493 aaKnown RBP7.72□□□□□ -1.17
NEDD9-208ENST00000504387 MTMR10Q9NXD2 777 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 DTLQ9NZJ0 730 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 AASSQ9UDR5 926 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 USP22Q9UPT9 525 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 WDR37Q9Y2I8 494 aa7.72□□□□□ -1.17
NEDD9-208ENST00000504387 A0A087WXM4 84 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 C2CD4BA6NLJ0 364 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 TRIM38O00635 465 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 MRASO14807 208 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 MED7O43513 233 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 MFSD11O43934 449 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 E2F6O75461 281 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 GMNNO75496 209 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 RGS20O76081 388 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 S100BP04271 92 aaPredicted RBP7.71□□□□□ -1.17
NEDD9-208ENST00000504387 POLBP06746 335 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 PIM1P11309 404 aaPredicted RBP7.71□□□□□ -1.17
NEDD9-208ENST00000504387 PAX3P23760 479 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 LRPAP1P30533 357 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 OXTRP30559 389 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 POLR2IP36954 125 aaKnown RBP7.71□□□□□ -1.17
NEDD9-208ENST00000504387 GPD2P43304 727 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 PCYT1AP49585 367 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 SNRPFP62306 86 aaKnown RBP7.71□□□□□ -1.17
NEDD9-208ENST00000504387 CSHL1Q14406 222 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 SF3B4Q15427 424 aaKnown RBP eCLIP7.71□□□□□ -1.17
NEDD9-208ENST00000504387 DHFR2Q86XF0 187 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 FSTL5Q8N475 847 aaPredicted RBP7.71□□□□□ -1.17
NEDD9-208ENST00000504387 HTRA1Q92743 480 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 TANKQ92844 425 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 BORCS5Q969J3 196 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 P2RY11Q96G91 374 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 TMEM176AQ96HP8 235 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 ADI1Q9BV57 179 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 SLC2A11Q9BYW1 496 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 SNX25Q9H3E2 840 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 ACAD9Q9H845 621 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 RPF1Q9H9Y2 349 aaKnown RBP7.71□□□□□ -1.17
NEDD9-208ENST00000504387 GID8Q9NWU2 228 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 IGSF9Q9P2J2 1179 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 NUDT5Q9UKK9 219 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 PRPF19Q9UMS4 504 aaKnown RBP7.71□□□□□ -1.17
NEDD9-208ENST00000504387 MTF2Q9Y483 593 aaPredicted RBP7.71□□□□□ -1.17
NEDD9-208ENST00000504387 CNTNAP1P78357 1384 aa7.71□□□□□ -1.17
NEDD9-208ENST00000504387 TRIP11Q15643 1979 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 KRBA1A5PL33 1030 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 BTBD19C9JJ37 291 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 PSMD11O00231 422 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 CCL22O00626 93 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 BCL10O95999 233 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 KCNA2P16389 499 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 ATP6V1B2P21281 511 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 GABRB3P28472 473 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 PTPN7P35236 360 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 ALDH3B2P48448 385 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 APLP1P51693 650 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 TPTEP56180 551 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 MPP1Q00013 466 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 POU6F1Q14863 301 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 VPS26BQ4G0F5 336 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 PPP1R26Q5T8A7 1209 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 SCIMPQ6UWF3 145 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 CARM1Q86X55 608 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 CROCCP3Q8IVE0 287 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 CLIP4Q8N3C7 705 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 VPS39Q96JC1 886 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 MAML3Q96JK9 1138 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 NPLQ9BXD5 320 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 MRPL4Q9BYD3 311 aaKnown RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 ING2Q9H160 280 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 XYLT2Q9H1B5 865 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 PRDM12Q9H4Q4 367 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 NOL6Q9H6R4 1146 aaKnown RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 ZBTB26Q9HCK0 441 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 PNMA8BQ9ULN7 279 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 PCDHGA7Q9Y5G6 932 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 SNX10Q9Y5X0 201 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 NUP205Q92621 2012 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 BTAF1O14981 1849 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 IL7RP16871 459 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 ACAT1P24752 427 aaKnown RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 NMBRP28336 390 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 SPRP35270 261 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 PTPN9P43378 593 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 SEPHS1P49903 392 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 TNFAIP1Q13829 316 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 ZBED5Q49AG3 693 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 PDCD4Q53EL6 469 aaKnown RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 REP15Q6BDI9 236 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 ANKRD26P1Q6NSI1 321 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 LDB1Q86U70 411 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 IGFN1Q86VF2 1251 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 CDKL3Q8IVW4 592 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 LPAR1Q92633 364 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 CELF6Q96J87 481 aaKnown RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 TEX13BQ9BXU2 312 aa7.71□□□□□ -1.18
NEDD9-208ENST00000504387 FAM49AQ9H0Q0 323 aaPredicted RBP7.71□□□□□ -1.18
NEDD9-208ENST00000504387 HIPK3Q9H422 1215 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms