RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 TBC1D3Q8IZP1 549 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 OR4N4Q8N0Y3 316 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 HORMAD2Q8N7B1 307 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 SLC35F5Q8WV83 523 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 C17orf50Q8WW18 174 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 GIMAP1Q8WWP7 306 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TIFAQ96CG3 184 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 CDHR1Q96JP9 859 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 UHRF2Q96PU4 802 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 GFM1Q96RP9 751 aaKnown RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 MMTAG2Q9BU76 263 aaKnown RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 GFRA4Q9GZZ7 299 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 IQCGQ9H095 443 aaKnown RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZHX3Q9H4I2 956 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 CCDC134Q9H6E4 229 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 EPS8L2Q9H6S3 715 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 STARD7Q9NQZ5 370 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 OCIAD1Q9NX40 245 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 QPCTLQ9NXS2 382 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 CWC15Q9P013 229 aaKnown RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 CGNQ9P2M7 1197 aaKnown RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 RAB21Q9UL25 225 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 TRPC5Q9UL62 973 aaPredicted RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 SRPRBQ9Y5M8 271 aaKnown RBP2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 IKBKGQ9Y6K9 419 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 PIK3R4Q99570 1358 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 PEG3Q9GZU2 1588 aa2.19□□□□□ -2.06
HMGB3P17-201ENST00000504195 FAM170AA1A519 330 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 LINC01553A4QN01 128 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 TRIM64CA6NLI5 447 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 TMCO5BA8MYB1 307 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 IFRD1O00458 451 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 DYNC1I1O14576 645 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 SERPINI2O75830 405 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 ANXA6P08133 673 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 HARSP12081 509 aaKnown RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 ITGB8P26012 769 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 C21orf33P30042 268 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 STIP1P31948 543 aaKnown RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 PPP3CCP48454 512 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 PRIM2P49643 509 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 OAZ1P54368 228 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 ALDH18A1P54886 795 aaKnown RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 IRX1P78414 480 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 RHAGQ02094 409 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 GABPB1Q06547 395 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 UBE4AQ14139 1066 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 HLTFQ14527 1009 aaKnown RBP eCLIP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 DHX8Q14562 1220 aaKnown RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 PLK5Q496M5 336 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 PARP10Q53GL7 1025 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 EFHC1Q5JVL4 640 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 VWA5B1Q5TIE3 1220 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 JAKMIP3Q5VZ66 844 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 TMEM71Q6P5X7 295 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 TMEM200AQ86VY9 491 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 BRSK2Q8IWQ3 736 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 MYOCDQ8IZQ8 938 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 SPAG16Q8N0X2 631 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 NDUFAF2Q8N183 169 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 CHCHD4Q8N4Q1 142 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 ARL6IP6Q8N6S5 226 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 TMEM217Q8N7C4 229 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 CCDC89Q8N998 374 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZNF566Q969W8 418 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 MCRS1Q96EZ8 462 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 MPP4Q96JB8 637 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 C8orf48Q96LL4 319 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 TIGD1Q96MW7 591 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZNF396Q96N95 335 aaPredicted RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 PKP4Q99569 1192 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 UTP14AQ9BVJ6 771 aaKnown RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 MAK16Q9BXY0 300 aaKnown RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 HIPK3Q9H422 1215 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 NECTIN3Q9NQS3 549 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 COMMD8Q9NX08 183 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 ZDHHC7Q9NXF8 308 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 ARL15Q9NXU5 204 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 PCSK1NQ9UHG2 260 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 TMCC3Q9ULS5 477 aa2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 COPG1Q9Y678 874 aaKnown RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 DDX49Q9Y6V7 483 aaKnown RBP2.18□□□□□ -2.06
HMGB3P17-201ENST00000504195 C11orf97A0A1B0GVM6 126 aaPredicted RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 TCRBV7S3A2A0A539 114 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 C17orf102A2RUQ5 167 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 TMEM247A6NEH6 219 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 H0YHG0 523 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 EYA2O00167 538 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 PCDH17O14917 1159 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 HNRNPDLO14979 420 aaKnown RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 LDB2O43679 373 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 ITM2AO43736 263 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 EDIL3O43854 480 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 LMX1BO60663 402 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 MTRF1O75570 445 aaKnown RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 RPP40O75818 363 aaKnown RBP2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 KIAA0754O94854 1291 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 TMCC1O94876 653 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 SOX30O94993 753 aa2.17□□□□□ -2.06
HMGB3P17-201ENST00000504195 HLA-DQA2P01906 255 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms