RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 PECAM1P16284 738 aaPredicted RBP10.21□□□□□ -0.77
NUP54-203ENST00000504173 PRKCHP24723 683 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 CXCR5P32302 372 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 GARSP41250 739 aaKnown RBP10.21□□□□□ -0.77
NUP54-203ENST00000504173 NR2C2P49116 596 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 SERPINH1P50454 418 aaKnown RBP10.21□□□□□ -0.77
NUP54-203ENST00000504173 CLCN6P51797 869 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 SATB1Q01826 763 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 IL10RBQ08334 325 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 SLC20A2Q08357 652 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 ADCY2Q08462 1091 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 SLC10A2Q12908 348 aaPredicted RBP10.21□□□□□ -0.77
NUP54-203ENST00000504173 GAS6Q14393 721 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 PDK1Q15118 436 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 CEP68Q76N32 757 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 METTL3Q86U44 580 aaKnown RBP10.21□□□□□ -0.77
NUP54-203ENST00000504173 SLC13A5Q86YT5 568 aaPredicted RBP10.21□□□□□ -0.77
NUP54-203ENST00000504173 LRRC49Q8IUZ0 686 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 SH2D3CQ8N5H7 860 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 ZNF366Q8N895 744 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 CCNYQ8ND76 341 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 NSMCE1Q8WV22 266 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 MYO19Q96H55 970 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 HERPUD2Q9BSE4 406 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 PDFQ9HBH1 243 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 VPS45Q9NRW7 570 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 SAE1Q9UBE0 346 aaPredicted RBP10.21□□□□□ -0.77
NUP54-203ENST00000504173 SLCO3A1Q9UIG8 710 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 KLK13Q9UKR3 277 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 MMP17Q9ULZ9 603 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 HS3ST2Q9Y278 367 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 RAI2Q9Y5P3 530 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 ACTL7AQ9Y615 435 aa10.21□□□□□ -0.77
NUP54-203ENST00000504173 MUC22E2RYF6 1773 aaPredicted RBP10.21□□□□□ -0.78
NUP54-203ENST00000504173 NYNRINQ9P2P1 1898 aaKnown RBP10.21□□□□□ -0.78
NUP54-203ENST00000504173 ASXL3Q9C0F0 2248 aa10.21□□□□□ -0.78
NUP54-203ENST00000504173 ACACAQ13085 2346 aa10.21□□□□□ -0.78
NUP54-203ENST00000504173 CXorf51AA0A1B0GTR3 108 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 TTC34A8MYJ7 566 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 WASH3PC4AMC7 463 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 K7ERQ8 282 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 SGK1O00141 431 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 AXIN1O15169 862 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 SMAD6O43541 496 aaKnown RBP10.2□□□□□ -0.78
NUP54-203ENST00000504173 ATP9BO43861 1147 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 MAFKO60675 156 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 ADAM23O75077 832 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 TMCC1O94876 653 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 APC2O95996 2303 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 EPHX1P07099 455 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 CASQ1P31415 396 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 VASPP50552 380 aaPredicted RBP10.2□□□□□ -0.78
NUP54-203ENST00000504173 ETF1P62495 437 aaKnown RBP10.2□□□□□ -0.78
NUP54-203ENST00000504173 OTUD4Q01804 1114 aaKnown RBP10.2□□□□□ -0.78
NUP54-203ENST00000504173 PTPN13Q12923 2485 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 ENPP2Q13822 863 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 STARD3Q14849 445 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 NOMO1Q15155 1222 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 DLG2Q15700 870 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 HNRNPA1L2Q32P51 320 aaKnown RBP10.2□□□□□ -0.78
NUP54-203ENST00000504173 TIGD7Q6NT04 549 aaPredicted RBP10.2□□□□□ -0.78
NUP54-203ENST00000504173 C22orf39Q6P5X5 142 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 SYT10Q6XYQ8 523 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 SYT13Q7L8C5 426 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 ADAT2Q7Z6V5 191 aaKnown RBP10.2□□□□□ -0.78
NUP54-203ENST00000504173 ZC3H18Q86VM9 953 aaKnown RBP10.2□□□□□ -0.78
NUP54-203ENST00000504173 CCDC13Q8IYE1 715 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 SPEM1Q8N4L4 309 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 TTC13Q8NBP0 860 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 ACTL9Q8TC94 416 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 LRRN4Q8WUT4 740 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 CASKIN2Q8WXE0 1202 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 HDAC11Q96DB2 347 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 ERLEC1Q96DZ1 483 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 PBKQ96KB5 322 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 C16orf45Q96MC5 204 aaPredicted RBP10.2□□□□□ -0.78
NUP54-203ENST00000504173 ZNF599Q96NL3 588 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 OLFM3Q96PB7 478 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 OSBPL9Q96SU4 736 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 GABRG3Q99928 467 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 EDEM2Q9BV94 578 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 TMEM245Q9H330 911 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 SUN2Q9UH99 717 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 SNX12Q9UMY4 172 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 FCF1Q9Y324 198 aaKnown RBP10.2□□□□□ -0.78
NUP54-203ENST00000504173 CELSR3Q9NYQ7 3312 aa10.2□□□□□ -0.78
NUP54-203ENST00000504173 TEP1Q99973 2627 aaKnown RBP10.19□□□□□ -0.78
NUP54-203ENST00000504173 EDDM13A0A1B0GTR0 161 aa10.19□□□□□ -0.78
NUP54-203ENST00000504173 TCRBV7S2A1N4TA0A589 114 aa10.19□□□□□ -0.78
NUP54-203ENST00000504173 C4orf47A7E2U8 309 aa10.19□□□□□ -0.78
NUP54-203ENST00000504173 H7C0C1 242 aa10.19□□□□□ -0.78
NUP54-203ENST00000504173 MCF2LO15068 1137 aa10.19□□□□□ -0.78
NUP54-203ENST00000504173 BNIP3LO60238 219 aa10.19□□□□□ -0.78
NUP54-203ENST00000504173 NEBLO76041 1014 aa10.19□□□□□ -0.78
NUP54-203ENST00000504173 CD160O95971 181 aa10.19□□□□□ -0.78
NUP54-203ENST00000504173 FGGP02679 453 aa10.19□□□□□ -0.78
NUP54-203ENST00000504173 VAV1P15498 845 aa10.19□□□□□ -0.78
NUP54-203ENST00000504173 TCP1P17987 556 aaKnown RBP10.19□□□□□ -0.78
NUP54-203ENST00000504173 CCNCP24863 283 aa10.19□□□□□ -0.78
NUP54-203ENST00000504173 MPLP40238 635 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms