RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 YBEYP58557 167 aaPredicted RBP12.17□□□□□ -0.46
MED28-203ENST00000503945 RPL7AP62424 266 aaKnown RBP12.17□□□□□ -0.46
MED28-203ENST00000503945 RPS21P63220 83 aaKnown RBP12.17□□□□□ -0.46
MED28-203ENST00000503945 RAD51Q06609 339 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 SGCGQ13326 291 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 SHBQ15464 509 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 ZNF284Q2VY69 593 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 MYLK3Q32MK0 819 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 MON1BQ7L1V2 547 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 SPATS2Q86XZ4 545 aaKnown RBP12.17□□□□□ -0.46
MED28-203ENST00000503945 CNDP2Q96KP4 475 aaKnown RBP12.17□□□□□ -0.46
MED28-203ENST00000503945 MCEEQ96PE7 176 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 CNPY3Q9BT09 278 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 SLC17A9Q9BYT1 436 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 CATSPERBQ9H7T0 1116 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 SCUBE2Q9NQ36 999 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 NDFIP2Q9NV92 336 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 PARVAQ9NVD7 372 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 WASF2Q9Y6W5 498 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 DOCK9Q9BZ29 2069 aa12.17□□□□□ -0.46
MED28-203ENST00000503945 KRIT1O00522 736 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 NEMP1O14524 444 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 ENC1O14682 589 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 TSPAN6O43657 245 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 CD160O95971 181 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 PAK4O96013 591 aaPredicted RBP12.16□□□□□ -0.46
MED28-203ENST00000503945 SERPINC1P01008 464 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 THEGLP0DJG4 465 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 ADRB3P13945 408 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 PRLRP16471 622 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 HNRNPA2B1P22626 353 aaKnown RBP12.16□□□□□ -0.46
MED28-203ENST00000503945 ITGB7P26010 798 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 MAMLD1Q13495 774 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 SMAD1Q15797 465 aaKnown RBP12.16□□□□□ -0.46
MED28-203ENST00000503945 HS1BP3Q53T59 392 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 INO80DQ53TQ3 878 aaPredicted RBP12.16□□□□□ -0.46
MED28-203ENST00000503945 MANEALQ5VSG8 457 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 SFMBT2Q5VUG0 894 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 CAVIN1Q6NZI2 390 aaKnown RBP12.16□□□□□ -0.46
MED28-203ENST00000503945 DHRS13Q6UX07 377 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 TTC7BQ86TV6 843 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 DCP2Q8IU60 420 aaKnown RBP12.16□□□□□ -0.46
MED28-203ENST00000503945 PYROXD2Q8N2H3 581 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 PDCD7Q8N8D1 485 aaKnown RBP12.16□□□□□ -0.46
MED28-203ENST00000503945 CASKIN2Q8WXE0 1202 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 RAB7BQ96AH8 199 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 CRELD1Q96HD1 420 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 EPAS1Q99814 870 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 ZDHHC6Q9H6R6 413 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 KLHL11Q9NVR0 708 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 FZD10Q9ULW2 581 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 PCDHGA1Q9Y5H4 931 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 ACTL7AQ9Y615 435 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 BPTFQ12830 3046 aa12.16□□□□□ -0.46
MED28-203ENST00000503945 LOC400499M0QZD8 3231 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 TCRBV5S1A1TA0A578 114 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 C16orf96A6NNT2 1141 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 RNF103O00237 685 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 CCP110O43303 1012 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 AP1G1O43747 822 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 RNF8O76064 485 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 GSRP00390 522 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 FTLP02792 175 aaPredicted RBP12.15□□□□□ -0.46
MED28-203ENST00000503945 GZMAP12544 262 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 JUPP14923 745 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 EPHA8P29322 1005 aaPredicted RBP12.15□□□□□ -0.46
MED28-203ENST00000503945 ASIC2Q16515 512 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 ZNF805Q5CZA5 627 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 PPP1R15BQ5SWA1 713 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 KIAA1161Q6NSJ0 714 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 LEKR1Q6ZMV7 388 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 Q6ZSR6 202 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 ZSCAN30Q86W11 494 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 TMPRSS12Q86WS5 348 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 RTL3Q8N8U3 475 aaKnown RBP12.15□□□□□ -0.46
MED28-203ENST00000503945 TMEM145Q8NBT3 493 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 OR2AP1Q8NGE2 309 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 ARHGEF26Q96DR7 871 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 MYOCQ99972 504 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 OSBPL1AQ9BXW6 950 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 EDEM3Q9BZQ6 932 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 TM6SF2Q9BZW4 377 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 HAUS4Q9H6D7 363 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 AIPL1Q9NZN9 384 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 IPO11Q9UI26 975 aaKnown RBP12.15□□□□□ -0.46
MED28-203ENST00000503945 CA5BQ9Y2D0 317 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 FADS3Q9Y5Q0 445 aa12.15□□□□□ -0.46
MED28-203ENST00000503945 A0A087WV48 116 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 A0A1W2PQC6 194 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 NEMP2A6NFY4 417 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 LRRC53A6NM62 1247 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 WASH4PA8MWX3 477 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 RASA4BC9J798 803 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 DAPK3O43293 454 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 RASA4O43374 803 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 CKMT2P17540 419 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 PSMA2P25787 234 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 HTR7P34969 479 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 CLDN6P56747 220 aa12.14□□□□□ -0.47
MED28-203ENST00000503945 CLDN2P57739 230 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms