RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 FYB2Q5VWT5 728 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 CMC1Q7Z7K0 106 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 WBP2Q969T9 261 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 PRKD2Q9BZL6 878 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 PCDH10Q9P2E7 1040 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 AGO1Q9UL18 857 aaKnown RBP21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 PLIN3O60664 434 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 CLDN11O75508 207 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 ETFBP38117 255 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 CSRP3P50461 194 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 ALG1LQ6GMV1 187 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 KIAA0930Q6ICG6 404 aaPredicted RBP21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 CHST9Q7L1S5 443 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 NUDCD3Q8IVD9 361 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 E2F7Q96AV8 911 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 VPS39Q96JC1 886 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 SLC2A6Q9UGQ3 507 aa21.61■■□□□ 1.05
UBE2D3-216ENST00000503742 LOC285095A0A1B0GVY8 99 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 MUSKO15146 869 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 F11P03951 625 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 LINC00271P0C7V0 271 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 TROVE2P10155 538 aaKnown RBP eCLIP21.6■■□□□ 1.052e-9■□□□□ 10
UBE2D3-216ENST00000503742 SERPINH1P50454 418 aaKnown RBP21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 SGSHP51688 502 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 EPHB3P54753 998 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 ADGRF1Q5T601 910 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 CES4AQ5XG92 561 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 C16orf46Q6P387 395 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 NECAB2Q7Z6G3 386 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 ZC3HC1Q86WB0 502 aaKnown RBP21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 SLC25A41Q8N5S1 370 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 OR7D4Q8NG98 312 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 ATXN7L3BQ96GX2 97 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 ZFRQ96KR1 1074 aaKnown RBP21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 GPR22Q99680 433 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 POLR1EQ9GZS1 481 aaKnown RBP21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 ZNF334Q9HCZ1 680 aaPredicted RBP21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 NPHS2Q9NP85 383 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 STOML2Q9UJZ1 356 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 CAPN7Q9Y6W3 813 aa21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 KIAA0100Q14667 2235 aaKnown RBP21.6■■□□□ 1.05
UBE2D3-216ENST00000503742 TTC24A2A3L6 582 aaPredicted RBP21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 VAPBO95292 243 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 MPOP05164 745 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 GABRB3P28472 473 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 OVGP1Q12889 678 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 CHI3L2Q15782 390 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 CNGA3Q16281 694 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 ATG16L1Q676U5 607 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 OTOP2Q7RTS6 562 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 ZBP1Q9H171 429 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 RHOJQ9H4E5 214 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 IL21Q9HBE4 155 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 OBSL1O75147 1896 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 HEATR9A2RTY3 570 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 PROCP04070 461 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 ATXN1LP0C7T5 689 aaKnown RBP21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 HADHAP40939 763 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 ABCG1P45844 678 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 BST1Q10588 318 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 BNIP1Q12981 228 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 CLEC14AQ86T13 490 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 MICALL1Q8N3F8 863 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 C7orf26Q96N11 449 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 SEMA3CQ99985 751 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 TRIM55Q9BYV6 548 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 IL23AQ9NPF7 189 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 CHKBQ9Y259 395 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 PCDHB12Q9Y5F1 795 aa21.59■■□□□ 1.05
UBE2D3-216ENST00000503742 A0A1B0GVM2 712 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 ILVBLA1L0T0 632 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 TCAF2A6NFQ2 919 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 KDELR3O43731 214 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 DNAJC8O75937 253 aaPredicted RBP21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 FGF18O76093 207 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 AHSGP02765 367 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 IRF1P10914 325 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 PAMP19021 973 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 CREMQ03060 361 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 ZNF235Q14590 738 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 TTC31Q49AM3 519 aaPredicted RBP21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 ACVR1CQ8NER5 493 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 RFWD2Q8NHY2 731 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 TMEM216Q9P0N5 145 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 STK39Q9UEW8 545 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 TBC1D30Q9Y2I9 924 aa21.58■■□□□ 1.05
UBE2D3-216ENST00000503742 SNNO75324 88 aaPredicted RBP21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 PAPSS2O95340 614 aaPredicted RBP21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 OLFM2O95897 454 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 CTSAP10619 480 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 ALDH3A1P30838 453 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 TMPRSS15P98073 1019 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 OCRLQ01968 901 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 SEPT6Q14141 434 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 GRM3Q14832 879 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 UGP2Q16851 508 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 SIRPB2Q5JXA9 342 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 C16orf59Q7L2K0 433 aa21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 SETD3Q86TU7 594 aaPredicted RBP21.57■■□□□ 1.04
UBE2D3-216ENST00000503742 ITIH5Q86UX2 942 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms