RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 DNAJB2P25686 324 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 OVGP1Q12889 678 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 GRTP1Q5TC63 336 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 TIGD7Q6NT04 549 aaPredicted RBP11.75□□□□□ -0.53
USP46-204ENST00000503060 ZNF683Q8IZ20 524 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 ZNF419Q96HQ0 510 aaPredicted RBP11.75□□□□□ -0.53
USP46-204ENST00000503060 NAF1Q96HR8 494 aaKnown RBP11.75□□□□□ -0.53
USP46-204ENST00000503060 MYLK2Q9H1R3 596 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 CRISPLD1Q9H336 500 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.75□□□□□ -0.53
USP46-204ENST00000503060 TXNDC16Q9P2K2 825 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 DKK3Q9UBP4 350 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 SOX13Q9UN79 622 aa11.75□□□□□ -0.53
USP46-204ENST00000503060 AAR2Q9Y312 384 aaKnown RBP11.75□□□□□ -0.53
USP46-204ENST00000503060 C2CD2LO14523 706 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 ANXA9O76027 345 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 HAPLN1P10915 354 aaPredicted RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 EPB42P16452 691 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 PBX3P40426 434 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 TAF10Q12962 218 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 TRIP4Q15650 581 aaPredicted RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 MGAT5BQ3V5L5 792 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 STXBP5Q5T5C0 1151 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 RNF19BQ6ZMZ0 732 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 TMEM173Q86WV6 379 aaPredicted RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 ATP6V0D2Q8N8Y2 350 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 SPATA22Q8NHS9 363 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 RFWD2Q8NHY2 731 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 MFSD3Q96ES6 412 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 SPATA17Q96L03 361 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 SEPT5Q99719 369 aaPredicted RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 MECRQ9BV79 373 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 TRIM55Q9BYV6 548 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 ZNF700Q9H0M5 742 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 NOL6Q9H6R4 1146 aaKnown RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 PRDM5Q9NQX1 630 aaPredicted RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 TLR8Q9NR97 1041 aaKnown RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 OLA1Q9NTK5 396 aaKnown RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 SIRPGQ9P1W8 387 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 MAGED2Q9UNF1 606 aaPredicted RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 TRIM17Q9Y577 477 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 PQBP1O60828 265 aaKnown RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 TGDSO95455 350 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 TBX18O95935 607 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 TOP3BO95985 862 aaKnown RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 HLA-DQB2P05538 268 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 RHOQP17081 205 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 PPM1FP49593 454 aaPredicted RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 PDE1BQ01064 536 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 SMARCB1Q12824 385 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 PDE1CQ14123 709 aaPredicted RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 MAP7D1Q3KQU3 841 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 MS4A13Q5J8X5 152 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 RASIP1Q5U651 963 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 KYAT3Q6YP21 454 aaKnown RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 NLRP9Q7RTR0 991 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 PGBD3Q8N328 593 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 SCLYQ96I15 445 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 LRRC37BQ96QE4 947 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 TBL1YQ9BQ87 522 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 ZYG11BQ9C0D3 744 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 CHRAC1Q9NRG0 131 aa11.74□□□□□ -0.53
USP46-204ENST00000503060 RBM22Q9NW64 420 aaKnown RBP eCLIP11.74□□□□□ -0.53
USP46-204ENST00000503060 IPO11Q9UI26 975 aaKnown RBP11.74□□□□□ -0.53
USP46-204ENST00000503060 TET1Q8NFU7 2136 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 CFAP73A6NFT4 308 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 BIRC5O15392 142 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 GLRA3O75311 464 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 MT-CYBP00156 380 aaPredicted RBP11.73□□□□□ -0.53
USP46-204ENST00000503060 BPGMP07738 259 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 MASP1P48740 699 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 GEMP55040 296 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 PSMD5Q16401 504 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 C10orf120Q5SQS8 335 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 TEDDM1Q5T9Z0 273 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 ATG16L1Q676U5 607 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 ANKS3Q6ZW76 656 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 TAS1R1Q7RTX1 841 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 NUDCD3Q8IVD9 361 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 UMODL1-AS1Q8N2C9 162 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 IPMKQ8NFU5 416 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 C2orf15Q8WU43 125 aaKnown RBP11.73□□□□□ -0.53
USP46-204ENST00000503060 BCL7CQ8WUZ0 217 aaPredicted RBP11.73□□□□□ -0.53
USP46-204ENST00000503060 JPH3Q8WXH2 748 aaPredicted RBP11.73□□□□□ -0.53
USP46-204ENST00000503060 BTN2A3PQ96KV6 586 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 PPP1R2P1Q96PQ5 205 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 RBBP8Q99708 897 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 TTPALQ9BTX7 342 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 KIFC1Q9BW19 673 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 OSBPL10Q9BXB5 764 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 MARCH2Q9P0N8 246 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 PPARGC1AQ9UBK2 798 aaKnown RBP11.73□□□□□ -0.53
USP46-204ENST00000503060 DCTN4Q9UJW0 460 aa11.73□□□□□ -0.53
USP46-204ENST00000503060 NYNRINQ9P2P1 1898 aaKnown RBP11.73□□□□□ -0.53
USP46-204ENST00000503060 MYCP01106 439 aaPredicted RBP11.72□□□□□ -0.53
USP46-204ENST00000503060 NMBRP28336 390 aa11.72□□□□□ -0.53
USP46-204ENST00000503060 SPRP35270 261 aaPredicted RBP11.72□□□□□ -0.53
USP46-204ENST00000503060 NDST2P52849 883 aa11.72□□□□□ -0.53
USP46-204ENST00000503060 RPL10AP62906 217 aaKnown RBP11.72□□□□□ -0.53
USP46-204ENST00000503060 BST1Q10588 318 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms