RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	DGKG	P49619	791 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	SERPINH1	P50454	418 aa	Known RBP	12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	SLC20A2	Q08357	652 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	SKIV2L	Q15477	1246 aa	Known RBP	12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	SLC14A2	Q15849	920 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	GEN1	Q17RS7	908 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	KDELC1	Q6UW63	502 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	LINGO4	Q6UY18	593 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	PRPF39	Q86UA1	669 aa	Known RBP	12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	RELL1	Q8IUW5	271 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	AHI1	Q8N157	1196 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	NAT16	Q8N8M0	369 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	TSEN2	Q8NCE0	465 aa	Known RBP	12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	NXPE3	Q969Y0	559 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	IMP4	Q96G21	291 aa	Known RBP	12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	NSMCE3	Q96MG7	304 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	TRPV5	Q9NQA5	729 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	DNAJC17	Q9NVM6	304 aa	Known RBP	12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	GTSE1	Q9NYZ3	720 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	XIRP2	A4UGR9	3374 aa		12.34	□□□□□ -0.43
MATR3-231	ENST00000502394	C5orf42	Q9H799	3197 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	ERI2	A8K979	691 aa	Known RBP	12.33	□□□□□ -0.44
MATR3-231	ENST00000502394		F5H423	210 aa	Predicted RBP	12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	PPFIA2	O75334	1257 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	ERLIN1	O75477	346 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	ZNF821	O75541	412 aa	Predicted RBP	12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	SRC	P12931	536 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	SP100	P23497	879 aa	Predicted RBP	12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	ADRA1A	P35348	466 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	SLC6A11	P48066	632 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	GEMIN4	P57678	1058 aa	Known RBP	12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	MAX	P61244	160 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	SKOR1	P84550	965 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	DSC2	Q02487	901 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	SULT2A1	Q06520	285 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	NR1H3	Q13133	447 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	ZNF235	Q14590	738 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	ITPRIPL2	Q3MIP1	535 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	MAP9	Q49MG5	647 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	MBLAC2	Q68D91	279 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	RETSAT	Q6NUM9	610 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	CAND1	Q86VP6	1230 aa	Known RBP	12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	MREG	Q8N565	214 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	SPATA22	Q8NHS9	363 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	PPM1E	Q8WY54	764 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	VOPP1	Q96AW1	172 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	ISG20	Q96AZ6	181 aa	Known RBP	12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	MYO19	Q96H55	970 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	MRGPRX3	Q96LB0	322 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	PWWP2A	Q96N64	755 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	SERPINB12	Q96P63	405 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	PPP1R2P1	Q96PQ5	205 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	WDR83	Q9BRX9	315 aa	Known RBP	12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	CINP	Q9BW66	212 aa	Predicted RBP	12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	FRMD8	Q9BZ67	464 aa	Predicted RBP	12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	POLR1E	Q9GZS1	481 aa	Known RBP	12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	VPS45	Q9NRW7	570 aa		12.33	□□□□□ -0.44
MATR3-231	ENST00000502394	MTRF1L	Q9UGC7	380 aa	Known RBP	12.33	□□□□□ -0.44
MATR3-231	ENST00000502394		K7ERQ8	282 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	EIF3H	O15372	352 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	PSMD3	O43242	534 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	SMAD6	O43541	496 aa	Known RBP	12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	ANXA9	O76027	345 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	MT-CYB	P00156	380 aa	Predicted RBP	12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	ASL	P04424	464 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	APRT	P07741	180 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	MLN	P12872	115 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	GRIA1	P42261	906 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	CSNK1D	P48730	415 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	GEM	P55040	296 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	NSUN2	Q08J23	767 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	MPP3	Q13368	585 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	AAK1	Q2M2I8	961 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	FNBP1L	Q5T0N5	605 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	SWT1	Q5T5J6	900 aa	Known RBP	12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	NAIF1	Q69YI7	327 aa	Predicted RBP	12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	GRAMD4	Q6IC98	578 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	TMC3	Q7Z5M5	1100 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	METTL3	Q86U44	580 aa	Known RBP	12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	AGGF1	Q8N302	714 aa	eCLIP	12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	BBS5	Q8N3I7	341 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	SH2D3C	Q8N5H7	860 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	TERB1	Q8NA31	727 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	MRGPRX2	Q96LB1	330 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	NUDCD1	Q96RS6	583 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	KCNK12	Q9HB15	430 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	CASS4	Q9NQ75	786 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	ARGLU1	Q9NWB6	273 aa	Predicted RBP	12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	DEC1	Q9P2X7	70 aa		12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	AAR2	Q9Y312	384 aa	Known RBP	12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	FCF1	Q9Y324	198 aa	Known RBP	12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	MUC22	E2RYF6	1773 aa	Predicted RBP	12.32	□□□□□ -0.44
MATR3-231	ENST00000502394	EYS	Q5T1H1	3165 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	LOC730098	B7Z3J9	87 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	PRRT4	C9JH25	899 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	ATP9B	O43861	1147 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	GJB3	O75712	270 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	NEBL	O76041	1014 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	CES1	P23141	567 aa		12.31	□□□□□ -0.44
MATR3-231	ENST00000502394	STK19	P49842	368 aa	Predicted RBP	12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms