RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 KRIT1O00522 736 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 DAPK3O43293 454 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 PCDH8O95206 1070 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 ADRB3P13945 408 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 IL1R2P27930 398 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 EIF4A3P38919 411 aaKnown RBP18.69■□□□□ 0.58
HOXD11-202ENST00000498438 NDST2P52849 883 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 RHOAP61586 193 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 IL9RQ01113 521 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 FOXC1Q12948 553 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 HNRNPDQ14103 355 aaKnown RBP18.69■□□□□ 0.58
HOXD11-202ENST00000498438 ACAP1Q15027 740 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 SMTNL2Q2TAL5 461 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 INO80DQ53TQ3 878 aaPredicted RBP18.69■□□□□ 0.58
HOXD11-202ENST00000498438 SLC45A4Q5BKX6 768 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 NEK5Q6P3R8 708 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 HORMAD1Q86X24 394 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 SETD7Q8WTS6 366 aaKnown RBP18.69■□□□□ 0.58
HOXD11-202ENST00000498438 KLK6Q92876 244 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 VOPP1Q96AW1 172 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 GDAP1L1Q96MZ0 367 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 DNAJC7Q99615 494 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 PCOLCE2Q9UKZ9 415 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 NENFQ9UMX5 172 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 CA5BQ9Y2D0 317 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 PCDHB9Q9Y5E1 797 aa18.69■□□□□ 0.58
HOXD11-202ENST00000498438 FLRT2O43155 660 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 CBFA2T3O75081 653 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 POP4O95707 220 aaKnown RBP18.68■□□□□ 0.58
HOXD11-202ENST00000498438 UGT2B4P06133 528 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 PRLRP16471 622 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 ERCC2P18074 760 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 SHC2P98077 582 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 PIGHQ14442 188 aaPredicted RBP18.68■□□□□ 0.58
HOXD11-202ENST00000498438 TRIP6Q15654 476 aaKnown RBP18.68■□□□□ 0.58
HOXD11-202ENST00000498438 ZNF284Q2VY69 593 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 MYLK3Q32MK0 819 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 FBXL19Q6PCT2 694 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 VSTM4Q8IW00 320 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 NIPA2Q8N8Q9 360 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 LRIG1Q96JA1 1093 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 MYOCQ99972 504 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 SLC39A8Q9C0K1 460 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 ZWILCHQ9H900 591 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 GDF3Q9NR23 364 aa18.68■□□□□ 0.58
HOXD11-202ENST00000498438 CWC15Q9P013 229 aaKnown RBP18.68■□□□□ 0.58
HOXD11-202ENST00000498438 UBA2Q9UBT2 640 aaPredicted RBP18.68■□□□□ 0.58
HOXD11-202ENST00000498438 ZFR2Q9UPR6 939 aaKnown RBP18.68■□□□□ 0.58
HOXD11-202ENST00000498438 ARHGAP42A6NI28 874 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 C16orf96A6NNT2 1141 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 PRAMEF26H0Y7S4 382 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 J3KR12 359 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 TLR4O00206 839 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 SLC31A1O15431 190 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 PRAMEF11O60813 436 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 IGSF6O95976 241 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 ZNF135P52742 658 aaPredicted RBP18.67■□□□□ 0.58
HOXD11-202ENST00000498438 NXPH1P58417 271 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 DPYSQ14117 519 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 STAT4Q14765 748 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 SUZ12Q15022 739 aaKnown RBP18.67■□□□□ 0.58
HOXD11-202ENST00000498438 DPYSL2Q16555 572 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 ZNF805Q5CZA5 627 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 PRAMEF14Q5SWL7 426 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 AFMIDQ63HM1 303 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 SEL1L3Q68CR1 1132 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 DBX2Q6ZNG2 339 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 ARHGAP12Q8IWW6 846 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 NPWQ8N729 165 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 MFSD2AQ8NA29 543 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 OR8K1Q8NGG5 319 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 HSPH1Q92598 858 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 CNTNAP3BQ96NU0 1288 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 ELF4Q99607 663 aaPredicted RBP18.67■□□□□ 0.58
HOXD11-202ENST00000498438 OSBPL1AQ9BXW6 950 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 CNTNAP3Q9BZ76 1288 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 PDFQ9HBH1 243 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 FZD3Q9NPG1 666 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.67■□□□□ 0.58
HOXD11-202ENST00000498438 LHX3Q9UBR4 397 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 IP6K2Q9UHH9 426 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 BTBD3Q9Y2F9 522 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 FADS3Q9Y5Q0 445 aa18.67■□□□□ 0.58
HOXD11-202ENST00000498438 A0A1B0GTQ1 180 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 H3BRJ5 948 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 AP1G1O43747 822 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 PCDHGA12O60330 932 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 DFNA5O60443 496 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 TOP3BO95985 862 aaKnown RBP18.66■□□□□ 0.58
HOXD11-202ENST00000498438 ABL2P42684 1182 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 HCAR3P49019 387 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 PAPOLAP51003 745 aaKnown RBP18.66■□□□□ 0.58
HOXD11-202ENST00000498438 SLC25A11Q02978 314 aaKnown RBP18.66■□□□□ 0.58
HOXD11-202ENST00000498438 CYTH1Q15438 398 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 TMEM259Q4ZIN3 620 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 BOLA3Q53S33 107 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 TXNRD3NBQ6F5E7 133 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 KIAA1161Q6NSJ0 714 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 IQCHQ86VS3 1027 aa18.66■□□□□ 0.58
HOXD11-202ENST00000498438 TMEM145Q8NBT3 493 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms