RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 KDELC2Q7Z4H8 507 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 TMEM200AQ86VY9 491 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 SCN4BQ8IWT1 228 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 CADM3Q8N126 398 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 PAQR4Q8N4S7 273 aaPredicted RBP2.61□□□□□ -1.99
RBM39-242ENST00000498280 ESX1Q8N693 406 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 PAF1Q8N7H5 531 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 ANKRD44Q8N8A2 993 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 ENDOVQ8N8Q3 282 aaKnown RBP2.61□□□□□ -1.99
RBM39-242ENST00000498280 NEXN-AS1Q8NBZ9 246 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 ADPRHL1Q8NDY3 354 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 IL17REQ8NFR9 667 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 FAM110DQ8TAY7 271 aaPredicted RBP2.61□□□□□ -1.99
RBM39-242ENST00000498280 C2CD4CQ8TF44 421 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 HTRA1Q92743 480 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 WDR77Q9BQA1 342 aaPredicted RBP2.61□□□□□ -1.99
RBM39-242ENST00000498280 TRIM31Q9BZY9 425 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 CTDSP1Q9GZU7 261 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 CDT1Q9H211 546 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 STN1Q9H668 368 aaKnown RBP2.61□□□□□ -1.99
RBM39-242ENST00000498280 ZNF304Q9HCX3 659 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 KRCC1Q9NPI7 259 aaPredicted RBP2.61□□□□□ -1.99
RBM39-242ENST00000498280 SLC22A11Q9NSA0 550 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 KLQ9UEF7 1012 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 PGAP2Q9UHJ9 254 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 KCNG2Q9UJ96 466 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 SLC25A13Q9UJS0 675 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 HSF4Q9ULV5 492 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 DTX4Q9Y2E6 619 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 PKP3Q9Y446 797 aa2.61□□□□□ -1.99
RBM39-242ENST00000498280 DENND3A2RUS2 1198 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 SAC3D1A6NKF1 404 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 BTBD18B2RXH4 712 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 MCIDASD6RGH6 385 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 SYN3O14994 580 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 HOXC11O43248 304 aaPredicted RBP2.6□□□□□ -1.99
RBM39-242ENST00000498280 ANP32CO43423 234 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 DHX16O60231 1041 aaKnown RBP2.6□□□□□ -1.99
RBM39-242ENST00000498280 HNRNPA1P09651 372 aaKnown RBP eCLIP2.6□□□□□ -1.99
RBM39-242ENST00000498280 CYP4B1P13584 511 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 ATP1A3P13637 1013 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 ARSBP15848 533 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 CD72P21854 359 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 LIFRP42702 1097 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 TLE2Q04725 743 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 ZBTB16Q05516 673 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 G3BP1Q13283 466 aaKnown RBP eCLIP2.6□□□□□ -1.99
RBM39-242ENST00000498280 TDGQ13569 410 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 HNF4GQ14541 408 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 ZNF718Q3SXZ3 478 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 GXYLT1Q4G148 440 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 SH2D4BQ5SQS7 431 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 JAKMIP3Q5VZ66 844 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 CCDC70Q6NSX1 233 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 DENND1BQ6P3S1 775 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 SLC30A9Q6PML9 568 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 CYB5R4Q7L1T6 521 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 FAM47BQ8NA70 645 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 USP38Q8NB14 1042 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 KDM1BQ8NB78 822 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 GABPB2Q8TAK5 448 aaPredicted RBP2.6□□□□□ -1.99
RBM39-242ENST00000498280 HVCN1Q96D96 273 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 RNFT2Q96EX2 444 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 MASTLQ96GX5 879 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 APOLD1Q96LR9 279 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 PHF7Q9BWX1 381 aaPredicted RBP2.6□□□□□ -1.99
RBM39-242ENST00000498280 GPR63Q9BZJ6 419 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 MROH8Q9H579 483 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 TASP1Q9H6P5 420 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 SDF2L1Q9HCN8 221 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 ERVK-5Q9HDB9 667 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 TXNRD2Q9NNW7 524 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 WASH6PQ9NQA3 447 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 TMEM248Q9NWD8 314 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 ARL15Q9NXU5 204 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 SLC8A2Q9UPR5 921 aa2.6□□□□□ -1.99
RBM39-242ENST00000498280 A0A0B4J293 547 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 TCRBV7S3A2A0A539 114 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 A6NLC8 198 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 C17orf100A8MU93 164 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 SH3BP5O60239 455 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 TSPAN3O60637 253 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 WDHD1O75717 1129 aaPredicted RBP2.59□□□□□ -1.99
RBM39-242ENST00000498280 METTL18O95568 372 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 KLKB1P03952 638 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 WEE2P0C1S8 567 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 HOXB9P17482 250 aaPredicted RBP2.59□□□□□ -1.99
RBM39-242ENST00000498280 XBP1P17861 261 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 GSTM2P28161 218 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 TYK2P29597 1187 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 HOXD3P31249 432 aaPredicted RBP2.59□□□□□ -1.99
RBM39-242ENST00000498280 RASSF2P50749 326 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 RPS6KA3P51812 740 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 MVDP53602 400 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 DLX5P56178 289 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 TMPRSS3P57727 454 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 ARHGAP8P85298 464 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 RHAGQ02094 409 aa2.59□□□□□ -1.99
RBM39-242ENST00000498280 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.59□□□□□ -1.99
RBM39-242ENST00000498280 AP5B1Q2VPB7 878 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms