RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 PDIK1LQ8N165 341 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 FBXO39Q8N4B4 442 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 GCSAMQ8N6F7 178 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 TRIML2Q8N7C3 387 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 BEST2Q8NFU1 509 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 OR2T12Q8NG77 320 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 OR4X1Q8NH49 305 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 SETD6Q8TBK2 473 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 HEXDCQ8WVB3 486 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 C3orf49Q96BT1 292 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 TRMT2BQ96GJ1 504 aaKnown RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 PGAM5Q96HS1 289 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 PSMG3-AS1Q96PY0 264 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 EIF2AK1Q9BQI3 630 aaKnown RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 ANAPC13Q9BS18 74 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 ACTR3CQ9C0K3 210 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 PABPC3Q9H361 631 aaKnown RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 CACYBPQ9HB71 228 aaKnown RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 ABCB9Q9NP78 766 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 SLC52A1Q9NWF4 448 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 RBAKQ9NYW8 714 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 SUCLA2Q9P2R7 463 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 PLEKHB1Q9UF11 243 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 PRODH2Q9UF12 536 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 MYRFQ9Y2G1 1151 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 EPB41L3Q9Y2J2 1087 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 TOGARAM1Q9Y4F4 1720 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 EIF3AQ14152 1382 aaKnown RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 IGKV1D-42A0A075B6H8 117 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 GOLGA8JA6NMD2 632 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 DBX1A6NMT0 343 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 CEACAM18A8MTB9 384 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 GOLGA8KD6RF30 607 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 IGF2BP3O00425 579 aaKnown RBP eCLIP1.47□□□□□ -2.17
XRN1-214ENST00000498077 DDX3XO00571 662 aaKnown RBP eCLIP1.47□□□□□ -2.17
XRN1-214ENST00000498077 NPFFO15130 113 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 OPA1O60313 960 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 CPNE3O75131 537 aaKnown RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 TNFSF13O75888 250 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 UBOX5O94941 541 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 SEMA4FO95754 770 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 DLGAP3O95886 979 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 BCL10O95999 233 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 LDHAP00338 332 aaKnown RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 KRT7P08729 469 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 MMP10P09238 476 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 MYBL2P10244 700 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 GNAT1P11488 350 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 ERCC3P19447 782 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 FPR2P25090 351 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 CHRNB4P30926 498 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 MAPK4P31152 587 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 PBX1P40424 430 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 CSNK1A1P48729 337 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 SLC7A2P52569 658 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 STAT2P52630 851 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 SOX4Q06945 474 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 CCDC173Q0VFZ6 552 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 TMEM187Q14656 261 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 DDB1Q16531 1140 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 EXOC3L4Q17RC7 722 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 C2orf76Q3KRA6 126 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 TIGD2Q4W5G0 525 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 WDR74Q6RFH5 385 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 MMS22LQ6ZRQ5 1243 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 LYPD1Q8N2G4 141 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 FAM184AQ8NB25 1140 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 SMARCC2Q8TAQ2 1214 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 EPS8L3Q8TE67 593 aaKnown RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 IPO4Q8TEX9 1081 aaKnown RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 SLC25A28Q96A46 364 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 ZNF669Q96BR6 464 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 R3HDM4Q96D70 268 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 ZMYND19Q96E35 227 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 PRMT6Q96LA8 375 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 CCDC114Q96M63 670 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 AARSD1Q9BTE6 412 aaKnown RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 HAPLN2Q9GZV7 340 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 ZNF768Q9H5H4 540 aaKnown RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 PIF1Q9H611 641 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 C7orf69Q9H7B7 122 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 MTHFD2LQ9H903 347 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 GPR108Q9NPR9 543 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 UCKL1Q9NWZ5 548 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 ZNF581Q9P0T4 197 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 SEMA5BQ9P283 1151 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 PSMC3IPQ9P2W1 217 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 IMPACTQ9P2X3 320 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 ZNF629Q9UEG4 869 aaPredicted RBP1.47□□□□□ -2.17
XRN1-214ENST00000498077 PCYOX1Q9UHG3 505 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 RNF6Q9Y252 685 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 PPIAL4AQ9Y536 164 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 PPP2R3BQ9Y5P8 575 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP1.47□□□□□ -2.17
XRN1-214ENST00000498077 LAMB1P07942 1786 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 EPG5Q9HCE0 2579 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 SLC22A23A1A5C7 686 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 BICDL2A1A5D9 508 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 FAM149AA5PLN7 773 aa1.47□□□□□ -2.17
XRN1-214ENST00000498077 POM121BA6NF01 834 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms