RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 KCNMB4Q86W47 210 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 MFN1Q8IWA4 741 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 CCDC117Q8IWD4 279 aaPredicted RBP8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 FAM217AQ8IXS0 508 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 CPXM2Q8N436 756 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 TEX26Q8N6G2 289 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 MRPL43Q8N983 215 aaKnown RBP8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 TDRD5Q8NAT2 981 aaKnown RBP8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 LEMD2Q8NC56 503 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 OR52K2Q8NGK3 314 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 GDAP1Q8TB36 358 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 TTC17Q96AE7 1141 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 CENPTQ96BT3 561 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 IMP4Q96G21 291 aaKnown RBP8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 SGSM3Q96HU1 749 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 MRGPRX2Q96LB1 330 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 TGS1Q96RS0 853 aaKnown RBP8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 CYP2S1Q96SQ9 504 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 KCNK17Q96T54 332 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 SEMA3CQ99985 751 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 MGME1Q9BQP7 344 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 SPON2Q9BUD6 331 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 FAM107BQ9H098 131 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 NSRP1Q9H0G5 558 aaKnown RBP8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 EPN3Q9H201 632 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 RABEP2Q9H5N1 569 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 MRM3Q9HC36 420 aaKnown RBP8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 MLXIPLQ9NP71 852 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 SSU72Q9NP77 194 aaKnown RBP8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 VPS45Q9NRW7 570 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 IL1RAPL1Q9NZN1 696 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 TXNDC16Q9P2K2 825 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 SEPT3Q9UH03 358 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 ARHGAP26Q9UNA1 814 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 ZNF510Q9Y2H8 683 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 TCAF1Q9Y4C2 921 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 CKAP5Q14008 2032 aa8.19□□□□□ -1.1
PDZRN3-212ENST00000498048 A0A1W2PPM1 405 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 CCDC78A2IDD5 438 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 GRXCR1A8MXD5 290 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 GOLGA8RI6L899 631 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 CBX4O00257 560 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 LEFTY2O00292 366 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 NRG2O14511 850 aaPredicted RBP8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 NDUFAB1O14561 156 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 KDELR3O43731 214 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 UGT1A9O60656 530 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 CLASP2O75122 1294 aaKnown RBP8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 FAM155BO75949 473 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 ALDH1A2O94788 518 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 ZWINTO95229 277 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 MT-ND3P03897 115 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 FGF1P05230 155 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 RHOP08100 348 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 MMP2P08253 660 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 SNRPAP09012 282 aaKnown RBP8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 HNRNPA1P09651 372 aaKnown RBP eCLIP8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 TPH1P17752 444 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 KRT4P19013 534 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 PAMP19021 973 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 GLDCP23378 1020 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 ADRA1AP35348 466 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 AVPR1AP37288 418 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 CCNFP41002 786 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 CSKP41240 450 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 CCR2P41597 374 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 MAGEA10P43363 369 aaPredicted RBP8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 CHRNA4P43681 627 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 EPHA5P54756 1037 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 DMTNQ08495 405 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 USP4Q13107 963 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 GPM6BQ13491 265 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 FRG1Q14331 258 aaKnown RBP8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 RFTN1Q14699 578 aaPredicted RBP8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 TEAD2Q15562 447 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC14A2Q15849 920 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 SEPT7Q16181 437 aaKnown RBP8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 ANKRD20A4Q4UJ75 823 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 LGSNQ5TDP6 509 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 ALG1LQ6GMV1 187 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 FAM109BQ6ICB4 259 aaPredicted RBP8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 PDE12Q6L8Q7 609 aaKnown RBP8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 PACS1Q6VY07 963 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 BBS7Q8IWZ6 715 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 UNC5BQ8IZJ1 945 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 PGBD5Q8N414 524 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC25A41Q8N5S1 370 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 DCAF4L2Q8NA75 395 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 BCAS4Q8TDM0 211 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 BHMTQ93088 406 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 ALKBH8Q96BT7 664 aaKnown RBP8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 MTBPQ96DY7 904 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 TCEAL4Q96EI5 215 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 IFT43Q96FT9 208 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 FEM1CQ96JP0 617 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 EXOC2Q96KP1 924 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 IQCGQ9H095 443 aaKnown RBP8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 CCDC134Q9H6E4 229 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 UGT1A7Q9HAW7 530 aa8.18□□□□□ -1.1
PDZRN3-212ENST00000498048 UGT1A10Q9HAW8 530 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms