RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SCLT1Q96NL6 688 aa4.01□□□□□ -1.77
CD46-218ENST00000496723 GFM1Q96RP9 751 aaKnown RBP4.01□□□□□ -1.77
CD46-218ENST00000496723 CKAP5Q14008 2032 aa4□□□□□ -1.77
CD46-218ENST00000496723 A0A096LPK6 155 aa4□□□□□ -1.77
CD46-218ENST00000496723 ADAP00813 363 aa4□□□□□ -1.77
CD46-218ENST00000496723 SERPINC1P01008 464 aa4□□□□□ -1.77
CD46-218ENST00000496723 HOXC6P09630 235 aa4□□□□□ -1.77
CD46-218ENST00000496723 GNLYP22749 145 aa4□□□□□ -1.77
CD46-218ENST00000496723 THPOP40225 353 aa4□□□□□ -1.77
CD46-218ENST00000496723 GPR12P47775 334 aa4□□□□□ -1.77
CD46-218ENST00000496723 PCYT1AP49585 367 aa4□□□□□ -1.77
CD46-218ENST00000496723 ABATP80404 500 aa4□□□□□ -1.77
CD46-218ENST00000496723 Q0VFX4 171 aa4□□□□□ -1.77
CD46-218ENST00000496723 SLC18A3Q16572 532 aa4□□□□□ -1.77
CD46-218ENST00000496723 ZNF284Q2VY69 593 aa4□□□□□ -1.77
CD46-218ENST00000496723 SLC4A8Q2Y0W8 1093 aa4□□□□□ -1.77
CD46-218ENST00000496723 ATG9BQ674R7 924 aa4□□□□□ -1.77
CD46-218ENST00000496723 ANKRD18AQ8IVF6 992 aa4□□□□□ -1.77
CD46-218ENST00000496723 IQCF1Q8N6M8 205 aa4□□□□□ -1.77
CD46-218ENST00000496723 OR4N2Q8NGD1 307 aa4□□□□□ -1.77
CD46-218ENST00000496723 HSPH1Q92598 858 aa4□□□□□ -1.77
CD46-218ENST00000496723 NEUROG1Q92886 237 aa4□□□□□ -1.77
CD46-218ENST00000496723 TMEM18Q96B42 140 aa4□□□□□ -1.77
CD46-218ENST00000496723 REEP2Q9BRK0 252 aa4□□□□□ -1.77
CD46-218ENST00000496723 MROH8Q9H579 483 aa4□□□□□ -1.77
CD46-218ENST00000496723 RIC8AQ9NPQ8 531 aa4□□□□□ -1.77
CD46-218ENST00000496723 ENTPD7Q9NQZ7 604 aa4□□□□□ -1.77
CD46-218ENST00000496723 CNPY2Q9Y2B0 182 aa4□□□□□ -1.77
CD46-218ENST00000496723 CLDN16Q9Y5I7 305 aa4□□□□□ -1.77
CD46-218ENST00000496723 RAI2Q9Y5P3 530 aa4□□□□□ -1.77
CD46-218ENST00000496723 FAM90A7PA6NKC0 464 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 SH2D7A6NKC9 451 aaPredicted RBP3.99□□□□□ -1.77
CD46-218ENST00000496723 FAM90A22PA8MWA6 464 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 FAM90A12PA8MX19 464 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 FAM90A23PA8MXZ1 464 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 EIF3FO00303 357 aaPredicted RBP3.99□□□□□ -1.77
CD46-218ENST00000496723 SLC25A17O43808 307 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 TSPAN3O60637 253 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 CKMT1AP12532 417 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 ARSFP54793 590 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 CRYZQ08257 329 aaKnown RBP3.99□□□□□ -1.77
CD46-218ENST00000496723 TBL3Q12788 808 aaKnown RBP3.99□□□□□ -1.77
CD46-218ENST00000496723 HNF4GQ14541 408 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 MAP3K21Q5TCX8 1036 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 NCAPH2Q6IBW4 605 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 FAM83HQ6ZRV2 1179 aaPredicted RBP3.99□□□□□ -1.77
CD46-218ENST00000496723 MON1BQ7L1V2 547 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.99□□□□□ -1.77
CD46-218ENST00000496723 RBFAQ8N0V3 343 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 TEX45Q8NA69 505 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 MIGA1Q8NAN2 632 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 TMEM163Q8TC26 289 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 TBC1D22AQ8WUA7 517 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 CLSTN3Q9BQT9 956 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.99□□□□□ -1.77
CD46-218ENST00000496723 NPFFR1Q9GZQ6 430 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 LMAN2LQ9H0V9 348 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 WDR6Q9NNW5 1121 aaKnown RBP3.99□□□□□ -1.77
CD46-218ENST00000496723 ALKBH4Q9NXW9 302 aa3.99□□□□□ -1.77
CD46-218ENST00000496723 SRPRBQ9Y5M8 271 aaKnown RBP3.99□□□□□ -1.77
CD46-218ENST00000496723 PER2O15055 1255 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 ASAP2O43150 1006 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 CHRM4P08173 479 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 ACAA1P09110 424 aaPredicted RBP3.98□□□□□ -1.77
CD46-218ENST00000496723 HSD3B1P14060 373 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 UBE3AQ05086 875 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 EGR4Q05215 589 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 SLC18A2Q05940 514 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 LTBQ06643 244 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 DSC1Q08554 894 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 DHX8Q14562 1220 aaKnown RBP3.98□□□□□ -1.77
CD46-218ENST00000496723 NAA25Q14CX7 972 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 TAF12Q16514 161 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 ATG16L1Q676U5 607 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 CAPRIN2Q6IMN6 1127 aaKnown RBP3.98□□□□□ -1.77
CD46-218ENST00000496723 CHD1LQ86WJ1 897 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 CPOQ8IVL8 374 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 RAB40AQ8WXH6 277 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 ADAMTS14Q8WXS8 1223 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 CNOT9Q92600 299 aaKnown RBP3.98□□□□□ -1.77
CD46-218ENST00000496723 GCC1Q96CN9 775 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 CD180Q99467 661 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 TAOK3Q9H2K8 898 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 SLC32A1Q9H598 525 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 MVB12BQ9H7P6 319 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 MDFICQ9P1T7 246 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 DGKBQ9Y6T7 804 aa3.98□□□□□ -1.77
CD46-218ENST00000496723 TRIP12Q14669 1992 aaPredicted RBP3.98□□□□□ -1.77
CD46-218ENST00000496723 KDM4EB2RXH2 506 aaPredicted RBP3.97□□□□□ -1.77
CD46-218ENST00000496723 ACOT8O14734 319 aa3.97□□□□□ -1.77
CD46-218ENST00000496723 ITM2AO43736 263 aa3.97□□□□□ -1.77
CD46-218ENST00000496723 CEP104O60308 925 aa3.97□□□□□ -1.77
CD46-218ENST00000496723 PLA2G2AP14555 144 aa3.97□□□□□ -1.77
CD46-218ENST00000496723 NAGAP17050 411 aa3.97□□□□□ -1.77
CD46-218ENST00000496723 CTPS1P17812 591 aa3.97□□□□□ -1.77
CD46-218ENST00000496723 TNFRSF8P28908 595 aa3.97□□□□□ -1.77
CD46-218ENST00000496723 CCT5P48643 541 aa3.97□□□□□ -1.77
CD46-218ENST00000496723 PPM1FP49593 454 aaPredicted RBP3.97□□□□□ -1.77
CD46-218ENST00000496723 NUDT6P53370 316 aa3.97□□□□□ -1.77
CD46-218ENST00000496723 CAPSQ13938 189 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms