RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 FADS3Q9Y5Q0 445 aa13.18□□□□□ -0.3
FN1-226ENST00000496542 BAHCC1Q9P281 2608 aa13.18□□□□□ -0.3
FN1-226ENST00000496542 ANKRD62A6NC57 917 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 A6NNZ2 444 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 GOLGA6L22H0YM25 854 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 KRIT1O00522 736 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 TRIM38O00635 465 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 NEMP1O14524 444 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 FFAR2O15552 330 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 CCP110O43303 1012 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 SIGLEC6O43699 453 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 CDK4P11802 303 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 DGKAP23743 735 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 FGL2Q14314 439 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 COL28A1Q2UY09 1125 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 PROX2Q3B8N5 592 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 EFHC2Q5JST6 749 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 ATXN7L2Q5T6C5 722 aaPredicted RBP13.17□□□□□ -0.3
FN1-226ENST00000496542 SCYL2Q6P3W7 929 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 Q6ZSR6 202 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 MON1BQ7L1V2 547 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 ABI3BPQ7Z7G0 1075 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 SLFN11Q7Z7L1 901 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 SLC22A18ASQ8N1D0 253 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 SLC25A45Q8N413 288 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 HNRNPLLQ8WVV9 542 aaKnown RBP13.17□□□□□ -0.3
FN1-226ENST00000496542 NTAN1Q96AB6 310 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 ISG20Q96AZ6 181 aaKnown RBP13.17□□□□□ -0.3
FN1-226ENST00000496542 FEM1CQ96JP0 617 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 MCEEQ96PE7 176 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 ERGIC2Q96RQ1 377 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 AGPAT1Q99943 283 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 SLC17A9Q9BYT1 436 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 RETREG1Q9H6L5 497 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 ITM2BQ9Y287 266 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 PTPRQQ9UMZ3 2332 aa13.17□□□□□ -0.3
FN1-226ENST00000496542 SIGLEC16A6NMB1 481 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 C16orf96A6NNT2 1141 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 RAD51BO15315 384 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 BUB1O43683 1085 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 AP1G1O43747 822 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 PIAS2O75928 621 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 GSRP00390 522 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 UGT2B4P06133 528 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 EPHB2P29323 1055 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 ABL2P42684 1182 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 SNRPD1P62314 119 aaKnown RBP13.16□□□□□ -0.3
FN1-226ENST00000496542 DAB2P98082 770 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 TARDBPQ13148 414 aaKnown RBP eCLIP13.16□□□□□ -0.3
FN1-226ENST00000496542 ZNF211Q13398 564 aaPredicted RBP13.16□□□□□ -0.3
FN1-226ENST00000496542 ILKQ13418 452 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 HS1BP3Q53T59 392 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 ZNF805Q5CZA5 627 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 ZNF542PQ5EBM4 170 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 CCDC183Q5T5S1 534 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 KYAT3Q6YP21 454 aaKnown RBP13.16□□□□□ -0.3
FN1-226ENST00000496542 AOPEPQ8N6M6 819 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 NETO2Q8NC67 525 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 OR2AP1Q8NGE2 309 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 NXPE2Q96DL1 559 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 DNAJC28Q9NX36 388 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 GGT7Q9UJ14 662 aa13.16□□□□□ -0.3
FN1-226ENST00000496542 CXorf51AA0A1B0GTR3 108 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 POM121BA6NF01 834 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 ZSCAN5CA6NGD5 496 aaPredicted RBP13.15□□□□□ -0.3
FN1-226ENST00000496542 IGLON5A6NGN9 336 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 KDELR3O43731 214 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 CREB3O43889 395 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 TMCC1O94876 653 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 PAK4O96013 591 aaPredicted RBP13.15□□□□□ -0.3
FN1-226ENST00000496542 ATP1A3P13637 1013 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 HOXB3P14651 431 aaPredicted RBP13.15□□□□□ -0.3
FN1-226ENST00000496542 FERP16591 822 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 ACP1P24666 158 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 ZNF143P52747 638 aaPredicted RBP13.15□□□□□ -0.3
FN1-226ENST00000496542 RPL7AP62424 266 aaKnown RBP13.15□□□□□ -0.3
FN1-226ENST00000496542 SGCGQ13326 291 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 NCAPHQ15003 741 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 MYLK3Q32MK0 819 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 LRRC73Q5JTD7 316 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 DCUN1D2Q6PH85 259 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 APTXQ7Z2E3 356 aaKnown RBP13.15□□□□□ -0.3
FN1-226ENST00000496542 TMC6Q7Z403 805 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 PLPP6Q8IY26 295 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 RTL3Q8N8U3 475 aaKnown RBP13.15□□□□□ -0.3
FN1-226ENST00000496542 OR4C6Q8NH72 309 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 BMFQ96LC9 184 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 GDAP1L1Q96MZ0 367 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 KLHL32Q96NJ5 620 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 EPAS1Q99814 870 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 KLC2Q9H0B6 622 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 HSD3B7Q9H2F3 369 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 NOL6Q9H6R4 1146 aaKnown RBP13.15□□□□□ -0.3
FN1-226ENST00000496542 HS3ST3A1Q9Y663 406 aa13.15□□□□□ -0.3
FN1-226ENST00000496542 TCRBV5S1A1TA0A578 114 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 RASA4BC9J798 803 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 SPINT1O43278 529 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 RASA4O43374 803 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 TSPAN6O43657 245 aa13.14□□□□□ -0.31
FN1-226ENST00000496542 POP4O95707 220 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms