RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 PDK4Q16654 411 aa13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 FSCBQ5H9T9 825 aa13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 ALG1LQ6GMV1 187 aa13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 KCNMB4Q86W47 210 aa13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 FAM217AQ8IXS0 508 aa13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 NSMCE3Q96MG7 304 aa13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 SRPK1Q96SB4 655 aaKnown RBP13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 CPNE1Q99829 537 aa13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 CORO1BQ9BR76 489 aa13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 MCMBPQ9BTE3 642 aa13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 POLR1EQ9GZS1 481 aaKnown RBP13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 TLR9Q9NR96 1032 aa13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 SLC2A6Q9UGQ3 507 aa13.86□□□□□ -0.19
SPTBN1-205ENST00000496323 TBL1XO60907 577 aa13.85□□□□□ -0.19
SPTBN1-205ENST00000496323 CKMP06732 381 aa13.85□□□□□ -0.19
SPTBN1-205ENST00000496323 ATXN1LP0C7T5 689 aaKnown RBP13.85□□□□□ -0.19
SPTBN1-205ENST00000496323 ZNF235Q14590 738 aa13.85□□□□□ -0.19
SPTBN1-205ENST00000496323 HHATQ5VTY9 493 aa13.85□□□□□ -0.19
SPTBN1-205ENST00000496323 RNF219Q5W0B1 726 aaPredicted RBP13.85□□□□□ -0.19
SPTBN1-205ENST00000496323 ESRP1Q6NXG1 681 aaKnown RBP13.85□□□□□ -0.19
SPTBN1-205ENST00000496323 RGS9BPQ6ZS82 235 aa13.85□□□□□ -0.19
SPTBN1-205ENST00000496323 MGME1Q9BQP7 344 aa13.85□□□□□ -0.19
SPTBN1-205ENST00000496323 SLC46A2Q9BY10 475 aa13.85□□□□□ -0.19
SPTBN1-205ENST00000496323 TREX1Q9NSU2 369 aa13.85□□□□□ -0.19
SPTBN1-205ENST00000496323 PRKAG3Q9UGI9 489 aa13.85□□□□□ -0.19
SPTBN1-205ENST00000496323 LOC285095A0A1B0GVY8 99 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 COPEO14579 308 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 RFPL2O75678 378 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 CD160O95971 181 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 TOP3BO95985 862 aaKnown RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 C1RP00736 705 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 MYL4P12829 197 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 RGRP47804 291 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 ARCN1P48444 511 aaKnown RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 SF3A3Q12874 501 aaKnown RBP eCLIP13.84□□□□□ -0.191e-6■■■□□ 18.6
SPTBN1-205ENST00000496323 GRTP1Q5TC63 336 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 GKAP1Q5VSY0 366 aaPredicted RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 MICALCLQ6ZW33 695 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 STRA8Q7Z7C7 330 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 TTC16Q8NEE8 873 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 PPHLN1Q8NEY8 458 aaKnown RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 PTCD2Q8WV60 388 aaKnown RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 FAM111AQ96PZ2 611 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 PSKH2Q96QS6 385 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 ELAC2Q9BQ52 826 aaKnown RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 SLC13A1Q9BZW2 595 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 MRM3Q9HC36 420 aaKnown RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 ASAH2Q9NR71 780 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 IARS2Q9NSE4 1012 aaKnown RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 PCMTD2Q9NV79 361 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 MKS1Q9NXB0 559 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 CFAP97Q9P2B7 532 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 UBA2Q9UBT2 640 aaPredicted RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 PLLPQ9Y342 182 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 CHD9Q3L8U1 2897 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 C5orf67F2Z3F1 127 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 TPP1O14773 563 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 GRM6O15303 877 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 MZF1P28698 734 aaPredicted RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 CDC25CP30307 473 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 SERPINH1P50454 418 aaKnown RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 ARF5P84085 180 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 DNAJC3Q13217 504 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 CYTH1Q15438 398 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 ZKSCAN8Q15776 578 aaPredicted RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 SIRPB2Q5JXA9 342 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 PPM1LQ5SGD2 360 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 CGB2Q6NT52 195 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 HTR3DQ70Z44 454 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 NDUFAF2Q8N183 169 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 ELMOD1Q8N336 334 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 WFDC5Q8TCV5 224 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 TMA16Q96EY4 203 aaKnown RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 RBBP8Q99708 897 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 SMG9Q9H0W8 520 aaKnown RBP13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 SEPT3Q9UH03 358 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 OR51B4Q9Y5P0 310 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 ALPK3Q96L96 1907 aa13.84□□□□□ -0.19
SPTBN1-205ENST00000496323 BPTFQ12830 3046 aa13.83□□□□□ -0.19
SPTBN1-205ENST00000496323 WDR91A4D1P6 747 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 GRXCR1A8MXD5 290 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 CBX4O00257 560 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 SNAP91O60641 907 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 ZMPSTE24O75844 475 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 PDE1CQ14123 709 aaPredicted RBP13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 CNGA3Q16281 694 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 PDPK2PQ6A1A2 396 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 FAM109BQ6ICB4 259 aaPredicted RBP13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 C6orf89Q6UWU4 347 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 BBS7Q8IWZ6 715 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 CARNMT1Q8N4J0 409 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 HJURPQ8NCD3 748 aaPredicted RBP13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 MICAL1Q8TDZ2 1067 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 BHMTQ93088 406 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 TCEAL4Q96EI5 215 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 MUC3BQ9H195 1237 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 VPS11Q9H270 941 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 NOD2Q9HC29 1040 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 PLXNA4Q9HCM2 1894 aa13.83□□□□□ -0.2
SPTBN1-205ENST00000496323 TXNDC16Q9P2K2 825 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms