RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 TAS2R14Q9NYV8 317 aa12.96□□□□□ -0.33
PTPRF-214ENST00000496043 NEU3Q9UQ49 428 aa12.96□□□□□ -0.33
PTPRF-214ENST00000496043 CEP295Q9C0D2 2601 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 LRRC53A6NM62 1247 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 TSPAN6O43657 245 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 PAK4O96013 591 aaPredicted RBP12.95□□□□□ -0.34
PTPRF-214ENST00000496043 SERPINC1P01008 464 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 FTLP02792 175 aaPredicted RBP12.95□□□□□ -0.34
PTPRF-214ENST00000496043 CAPNS1P04632 268 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 GZMAP12544 262 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 HTR7P34969 479 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 NR1I3Q14994 352 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 SMAD1Q15797 465 aaKnown RBP12.95□□□□□ -0.34
PTPRF-214ENST00000496043 TMEM259Q4ZIN3 620 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 SEL1L3Q68CR1 1132 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 PLEKHA7Q6IQ23 1121 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 TMC6Q7Z403 805 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 TMPRSS12Q86WS5 348 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 UMODL1-AS1Q8N2C9 162 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 MYOCQ99972 504 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 SYT11Q9BT88 431 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 OSBPL1AQ9BXW6 950 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 CCDC86Q9H6F5 360 aaKnown RBP12.95□□□□□ -0.34
PTPRF-214ENST00000496043 NOL6Q9H6R4 1146 aaKnown RBP12.95□□□□□ -0.34
PTPRF-214ENST00000496043 FZD3Q9NPG1 666 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 PLXNA2O75051 1894 aa12.95□□□□□ -0.34
PTPRF-214ENST00000496043 DOCK4Q8N1I0 1966 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 A0A1B0GTH6 734 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 RASA4BC9J798 803 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 NEMP1O14524 444 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 FGF10O15520 208 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-214ENST00000496043 RASA4O43374 803 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 RNF8O76064 485 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 CKMT2P17540 419 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 PSMA2P25787 234 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 GKP32189 559 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 PRKCIP41743 596 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 CLDN2P57739 230 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 TPM4P67936 248 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 OGDHQ02218 1023 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 KLHL30Q0D2K2 578 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 SERINC3Q13530 473 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 IQCB1Q15051 598 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 PARP15Q460N3 678 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 HS1BP3Q53T59 392 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 ERMARDQ5T6L9 678 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 DHRS13Q6UX07 377 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 GDPD4Q6W3E5 623 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 Q6ZSR6 202 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 PARS2Q7L3T8 475 aaKnown RBP12.94□□□□□ -0.34
PTPRF-214ENST00000496043 KANSL1Q7Z3B3 1105 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 ZNF571Q7Z3V5 609 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-214ENST00000496043 ABI3BPQ7Z7G0 1075 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 TTC7BQ86TV6 843 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 OR13H1Q8NG92 308 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 OR6K2Q8NGY2 324 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 ASB12Q8WXK4 309 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 ARHGEF26Q96DR7 871 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 IFT43Q96FT9 208 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 BMFQ96LC9 184 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 GDAP1L1Q96MZ0 367 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 KLHL32Q96NJ5 620 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 LENG8Q96PV6 779 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-214ENST00000496043 C1QTNF2Q9BXJ5 285 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 CALN1Q9BXU9 219 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 TTYH3Q9C0H2 523 aa12.94□□□□□ -0.34
PTPRF-214ENST00000496043 KMT2BQ9UMN6 2715 aaPredicted RBP12.94□□□□□ -0.34
PTPRF-214ENST00000496043 TRABD2BA6NFA1 517 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 TMEM191CA6NGB0 347 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 IGLON5A6NGN9 336 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 A6NNZ2 444 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 EIF3CLB5ME19 914 aaKnown RBP12.93□□□□□ -0.34
PTPRF-214ENST00000496043 TAF4O00268 1085 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 DAPK3O43293 454 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 RFPL3O75679 317 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 TMCC1O94876 653 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 IGSF6O95976 241 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 UGT2B4P06133 528 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 JUPP14923 745 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 DGKAP23743 735 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 NDST2P52849 883 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 TPI1P60174 286 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 RHOAP61586 193 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 DNAJC3Q13217 504 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 CYTH1Q15438 398 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 ATXN7L2Q5T6C5 722 aaPredicted RBP12.93□□□□□ -0.34
PTPRF-214ENST00000496043 GCNT7Q6ZNI0 430 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 SLC25A45Q8N413 288 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 PDCD7Q8N8D1 485 aaKnown RBP12.93□□□□□ -0.34
PTPRF-214ENST00000496043 TSC1Q92574 1164 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 HMCESQ96FZ2 354 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 EIF3CQ99613 913 aaKnown RBP12.93□□□□□ -0.34
PTPRF-214ENST00000496043 NCAPGQ9BPX3 1015 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 KLC2Q9H0B6 622 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 DHX35Q9H5Z1 703 aaKnown RBP12.93□□□□□ -0.34
PTPRF-214ENST00000496043 CNOT8Q9UFF9 292 aaKnown RBP12.93□□□□□ -0.34
PTPRF-214ENST00000496043 PCSK1NQ9UHG2 260 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 IPO11Q9UI26 975 aaKnown RBP12.93□□□□□ -0.34
PTPRF-214ENST00000496043 MFHAS1Q9Y4C4 1052 aa12.93□□□□□ -0.34
PTPRF-214ENST00000496043 TMEM131Q92545 1883 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms