RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 FEM1CQ96JP0 617 aa24.64■■□□□ 1.54
HLA-C-209ENST00000495835 BTBD3Q9Y2F9 522 aa24.64■■□□□ 1.54
HLA-C-209ENST00000495835 SPEGQ15772 3267 aa24.64■■□□□ 1.53
HLA-C-209ENST00000495835 ASPMQ8IZT6 3477 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 GOLGA6L19H0YKK7 550 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 BUB1O43683 1085 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 PCDH8O95206 1070 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 ITGAVP06756 1048 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 HNRNPA2B1P22626 353 aaKnown RBP24.63■■□□□ 1.53
HLA-C-209ENST00000495835 AKT2P31751 481 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 NDST2P52849 883 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 RPS21P63220 83 aaKnown RBP24.63■■□□□ 1.53
HLA-C-209ENST00000495835 RAD51Q06609 339 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 SERINC3Q13530 473 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 MYLK3Q32MK0 819 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 TMEM259Q4ZIN3 620 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 ZNF805Q5CZA5 627 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 SLCO6A1Q86UG4 719 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 LUZP1Q86V48 1076 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 ARHGEF26Q96DR7 871 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 KLHDC7BQ96G42 594 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 TM6SF2Q9BZW4 377 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 ZDHHC6Q9H6R6 413 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 CNOT8Q9UFF9 292 aaKnown RBP24.63■■□□□ 1.53
HLA-C-209ENST00000495835 AP4E1Q9UPM8 1137 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 MFHAS1Q9Y4C4 1052 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 FADS3Q9Y5Q0 445 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 HS3ST3A1Q9Y663 406 aa24.63■■□□□ 1.53
HLA-C-209ENST00000495835 TRPM6Q9BX84 2022 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 CACNA1BQ00975 2339 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 RASA4BC9J798 803 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 RNF103O00237 685 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 RASA4O43374 803 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 EPHA8P29322 1005 aaPredicted RBP24.62■■□□□ 1.53
HLA-C-209ENST00000495835 TPI1P60174 286 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 SHBQ15464 509 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 SKOR2Q2VWA4 1001 aaPredicted RBP24.62■■□□□ 1.53
HLA-C-209ENST00000495835 VPS36Q86VN1 386 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 ZNF354CQ86Y25 554 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 DCP2Q8IU60 420 aaKnown RBP24.62■■□□□ 1.53
HLA-C-209ENST00000495835 TOR4AQ9NXH8 423 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 KLK13Q9UKR3 277 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 ZFR2Q9UPR6 939 aaKnown RBP24.62■■□□□ 1.53
HLA-C-209ENST00000495835 ACTL7AQ9Y615 435 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 AKAP13Q12802 2813 aa24.62■■□□□ 1.53
HLA-C-209ENST00000495835 USP24Q9UPU5 2620 aa24.61■■□□□ 1.53
HLA-C-209ENST00000495835 C16orf96A6NNT2 1141 aa24.61■■□□□ 1.53
HLA-C-209ENST00000495835 C1QTNF9BB2RNN3 333 aa24.61■■□□□ 1.53
HLA-C-209ENST00000495835 TSPAN6O43657 245 aa24.61■■□□□ 1.53
HLA-C-209ENST00000495835 C1QTNF9P0C862 333 aa24.61■■□□□ 1.53
HLA-C-209ENST00000495835 HGSNATQ68CP4 663 aa24.61■■□□□ 1.53
HLA-C-209ENST00000495835 SPATS2Q86XZ4 545 aaKnown RBP24.61■■□□□ 1.53
HLA-C-209ENST00000495835 RYBPQ8N488 228 aaPredicted RBP24.61■■□□□ 1.53
HLA-C-209ENST00000495835 ASB12Q8WXK4 309 aa24.61■■□□□ 1.53
HLA-C-209ENST00000495835 ZNF653Q96CK0 615 aa24.61■■□□□ 1.53
HLA-C-209ENST00000495835 GDAP1L1Q96MZ0 367 aa24.61■■□□□ 1.53
HLA-C-209ENST00000495835 FTSJ1Q9UET6 329 aa24.61■■□□□ 1.53
HLA-C-209ENST00000495835 CAPN11Q9UMQ6 739 aa24.61■■□□□ 1.53
HLA-C-209ENST00000495835 KRIT1O00522 736 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 SLC31A1O15431 190 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 ATMINO43313 823 aaPredicted RBP24.6■■□□□ 1.53
HLA-C-209ENST00000495835 PRPSAP2O60256 369 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 TMCC1O94876 653 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 IGSF6O95976 241 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 ATXN1LP0C7T5 689 aaKnown RBP24.6■■□□□ 1.53
HLA-C-209ENST00000495835 CDK4P11802 303 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 SKILP12757 684 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 HCAR3P49019 387 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 ZBED6P86452 979 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 GRM3Q14832 879 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 PRAMEF14Q5SWL7 426 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 PARS2Q7L3T8 475 aaKnown RBP24.6■■□□□ 1.53
HLA-C-209ENST00000495835 ARFGAP1Q8N6T3 406 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 PNPLA1Q8N8W4 532 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 HCAR2Q8TDS4 363 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 HMCESQ96FZ2 354 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 LENG8Q96PV6 779 aaPredicted RBP24.6■■□□□ 1.53
HLA-C-209ENST00000495835 SLC17A9Q9BYT1 436 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 CPEB1Q9BZB8 566 aaKnown RBP24.6■■□□□ 1.53
HLA-C-209ENST00000495835 LRRC19Q9H756 370 aa24.6■■□□□ 1.53
HLA-C-209ENST00000495835 EEF2KO00418 725 aaKnown RBP24.59■■□□□ 1.53
HLA-C-209ENST00000495835 SERPING1P05155 500 aa24.59■■□□□ 1.53
HLA-C-209ENST00000495835 THEGLP0DJG4 465 aa24.59■■□□□ 1.53
HLA-C-209ENST00000495835 PCK1P35558 622 aa24.59■■□□□ 1.53
HLA-C-209ENST00000495835 IL9RQ01113 521 aa24.59■■□□□ 1.53
HLA-C-209ENST00000495835 GDPD4Q6W3E5 623 aa24.59■■□□□ 1.53
HLA-C-209ENST00000495835 ABI3BPQ7Z7G0 1075 aa24.59■■□□□ 1.53
HLA-C-209ENST00000495835 VOPP1Q96AW1 172 aa24.59■■□□□ 1.53
HLA-C-209ENST00000495835 IFT43Q96FT9 208 aa24.59■■□□□ 1.53
HLA-C-209ENST00000495835 DHX35Q9H5Z1 703 aaKnown RBP24.59■■□□□ 1.53
HLA-C-209ENST00000495835 PCDHGA1Q9Y5H4 931 aa24.59■■□□□ 1.53
HLA-C-209ENST00000495835 ARHGAP42A6NI28 874 aa24.58■■□□□ 1.53
HLA-C-209ENST00000495835 C1SP09871 688 aa24.58■■□□□ 1.53
HLA-C-209ENST00000495835 PRLRP16471 622 aa24.58■■□□□ 1.53
HLA-C-209ENST00000495835 MIPP30301 263 aa24.58■■□□□ 1.53
HLA-C-209ENST00000495835 SUOXP51687 545 aa24.58■■□□□ 1.53
HLA-C-209ENST00000495835 RHOAP61586 193 aa24.58■■□□□ 1.53
HLA-C-209ENST00000495835 TDRD12Q587J7 1177 aaKnown RBP24.58■■□□□ 1.53
HLA-C-209ENST00000495835 TMPRSS7Q7RTY8 843 aa24.58■■□□□ 1.53
HLA-C-209ENST00000495835 GATAD2AQ86YP4 633 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms