RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 STRADBQ9C0K7 418 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 ADNPQ9H2P0 1102 aa13.7□□□□□ -0.22
COL1A1-209ENST00000495677 APOBEC3BQ9UH17 382 aaKnown RBP13.7□□□□□ -0.22
COL1A1-209ENST00000495677 RELNP78509 3460 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 ZFC3H1O60293 1989 aaKnown RBP13.69□□□□□ -0.22
COL1A1-209ENST00000495677 DRGXA6NNA5 263 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 CASC3O15234 703 aaKnown RBP13.69□□□□□ -0.22
COL1A1-209ENST00000495677 MED7O43513 233 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 CALCAP01258 141 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 RHOCP08134 193 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 FAM87AP0C7U9 286 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 TLE1Q04724 770 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 LRRC63Q05C16 580 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 CETN1Q12798 172 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 SERINC3Q13530 473 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 TAF5Q15542 800 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 TBR1Q16650 682 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 DENND1BQ6P3S1 775 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 B3GNT8Q7Z7M8 397 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 SMYD4Q8IYR2 804 aaPredicted RBP13.69□□□□□ -0.22
COL1A1-209ENST00000495677 ZNF683Q8IZ20 524 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 PHACTR4Q8IZ21 702 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 PCDH20Q8N6Y1 951 aaKnown RBP13.69□□□□□ -0.22
COL1A1-209ENST00000495677 GFM1Q96RP9 751 aaKnown RBP13.69□□□□□ -0.22
COL1A1-209ENST00000495677 TSG101Q99816 390 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 LRRC61Q9BV99 259 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 SLC13A1Q9BZW2 595 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 CLPBQ9H078 707 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 FAM204AQ9H8W3 233 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 TMEM51Q9NW97 253 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 PNMA8BQ9ULN7 279 aaPredicted RBP13.69□□□□□ -0.22
COL1A1-209ENST00000495677 PCDHGA4Q9Y5G9 962 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 NBASA2RRP1 2371 aa13.69□□□□□ -0.22
COL1A1-209ENST00000495677 A0A0D9SEW6 157 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 A0A1W2PQ27 194 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 A0A1W2PQ64 194 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 A0A1W2PQC6 194 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 IGLON5A6NGN9 336 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 D6RAR5 112 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 HSF2BPO75031 334 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 PAGE1O75459 146 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 CNTN5O94779 1100 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 TSHRP16473 764 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 CD82P27701 267 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 BLKP51451 505 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 THOP1P52888 689 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 ZFP36L1Q07352 338 aaKnown RBP13.68□□□□□ -0.22
COL1A1-209ENST00000495677 SRSF6Q13247 344 aaKnown RBP13.68□□□□□ -0.22
COL1A1-209ENST00000495677 ALFQ53S48 1182 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 MANEAQ5SRI9 462 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 ZNF658Q5TYW1 1059 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-209ENST00000495677 ZNF783Q6ZMS7 281 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 RRAGAQ7L523 313 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 RBFAQ8N0V3 343 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 FSTL5Q8N475 847 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-209ENST00000495677 ARL10Q8N8L6 244 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 EHBP1Q8NDI1 1231 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 GRIN3AQ8TCU5 1115 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 SCG3Q8WXD2 468 aaKnown RBP13.68□□□□□ -0.22
COL1A1-209ENST00000495677 C1orf74Q96LT6 269 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 TCEAL2Q9H3H9 227 aaPredicted RBP13.68□□□□□ -0.22
COL1A1-209ENST00000495677 ARHGEF38Q9NXL2 777 aa13.68□□□□□ -0.22
COL1A1-209ENST00000495677 TEX15Q9BXT5 2789 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 ANKRD36A6QL64 1941 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 IGLV3-10A0A075B6K4 115 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 A0A1W2PQM1 296 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 ILVBLA1L0T0 632 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.67□□□□□ -0.22
COL1A1-209ENST00000495677 M0QYT0 321 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 ZMPSTE24O75844 475 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 ZNF202O95125 648 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 JMJD7P0C870 316 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 NOS2P35228 1153 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 SERPINH1P50454 418 aaKnown RBP13.67□□□□□ -0.22
COL1A1-209ENST00000495677 PMS1P54277 932 aaKnown RBP13.67□□□□□ -0.22
COL1A1-209ENST00000495677 C1orf61Q13536 156 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 ELOCQ15369 112 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 CARD16Q5EG05 197 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 BRMS1LQ5PSV4 323 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 SMYD5Q6GMV2 418 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 RETSATQ6NUM9 610 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 MACC1Q6ZN28 852 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 PARS2Q7L3T8 475 aaKnown RBP13.67□□□□□ -0.22
COL1A1-209ENST00000495677 JAMLQ86YT9 394 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 ARHGEF19Q8IW93 802 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 ISG20Q96AZ6 181 aaKnown RBP13.67□□□□□ -0.22
COL1A1-209ENST00000495677 ARHGEF26Q96DR7 871 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 PGAP3Q96FM1 320 aaPredicted RBP13.67□□□□□ -0.22
COL1A1-209ENST00000495677 CCDC34Q96HJ3 373 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 SPATA32Q96LK8 384 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 KREMEN1Q96MU8 473 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 GSDMAQ96QA5 445 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 GTPBP4Q9BZE4 634 aaKnown RBP13.67□□□□□ -0.22
COL1A1-209ENST00000495677 SIK2Q9H0K1 926 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 TNKS2Q9H2K2 1166 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 LRRN3Q9H3W5 708 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 EPB41L5Q9HCM4 733 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 RMND1Q9NWS8 449 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 RRN3Q9NYV6 651 aa13.67□□□□□ -0.22
COL1A1-209ENST00000495677 RABGEF1Q9UJ41 708 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms