RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 FUBP1Q96AE4 644 aaKnown RBP9.07□□□□□ -0.96
GARNL3-219ENST00000495172 DDA1Q9BW61 102 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 TWSG1Q9GZX9 223 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 NUCKS1Q9H1E3 243 aaKnown RBP9.07□□□□□ -0.96
GARNL3-219ENST00000495172 BLOC1S4Q9NUP1 217 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 AKAP7Q9P0M2 348 aaPredicted RBP9.07□□□□□ -0.96
GARNL3-219ENST00000495172 APPL1Q9UKG1 709 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 ITM2BQ9Y287 266 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 USP3Q9Y6I4 520 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 RPS6KL1Q9Y6S9 549 aa9.07□□□□□ -0.96
GARNL3-219ENST00000495172 C1QTNF3-AMACRE9PGA6 284 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 FPGTO14772 594 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 PDGFRAP16234 1089 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 ZNF28P17035 718 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 ITGA3P26006 1051 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 HTR1EP28566 365 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 CSF2RBP32927 897 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 TOB1P50616 345 aaPredicted RBP9.06□□□□□ -0.96
GARNL3-219ENST00000495172 THOP1P52888 689 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 ABHD18Q0P651 414 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 SEMA5AQ13591 1074 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 RAPSNQ13702 412 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 ARHGEF7Q14155 803 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 DLG2Q15700 870 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 ALG11Q2TAA5 492 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 HYIQ5T013 277 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 DCAF12Q5T6F0 453 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 BMPERQ8N8U9 685 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 LRRN4CLQ8ND94 238 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 GRIN3AQ8TCU5 1115 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 STRA6Q9BX79 667 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 MBNL1Q9NR56 388 aaKnown RBP9.06□□□□□ -0.96
GARNL3-219ENST00000495172 SEMA3GQ9NS98 782 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 XPO7Q9UIA9 1087 aaKnown RBP9.06□□□□□ -0.96
GARNL3-219ENST00000495172 CHD5Q8TDI0 1954 aa9.06□□□□□ -0.96
GARNL3-219ENST00000495172 AKAP6Q13023 2319 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 PIPSLA2A3N6 862 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 ARGFXA6NJG6 315 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 A8MU76 341 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 K7ERQ8 282 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 TULP2O00295 520 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 PFKFB2O60825 505 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 TBCAO75347 108 aaKnown RBP9.05□□□□□ -0.96
GARNL3-219ENST00000495172 MAP3K6O95382 1288 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 CPNE6O95741 557 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 GLB1P16278 677 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 NFKBIAP25963 317 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 CD1CP29017 333 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 EIF4A3P38919 411 aaKnown RBP9.05□□□□□ -0.96
GARNL3-219ENST00000495172 CASP4P49662 377 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 RPS18P62269 152 aaKnown RBP9.05□□□□□ -0.96
GARNL3-219ENST00000495172 PPARDQ03181 441 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 DNM1Q05193 864 aaKnown RBP9.05□□□□□ -0.96
GARNL3-219ENST00000495172 SNAP47Q5SQN1 464 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 NEK5Q6P3R8 708 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 VPS36Q86VN1 386 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 NAGSQ8N159 534 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 NXPE1Q8N323 547 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 GPD1LQ8N335 351 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 OR52K2Q8NGK3 314 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 CCL4L1Q8NHW4 92 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 CCDC127Q96BQ5 260 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 TNIP3Q96KP6 325 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 EDEM3Q9BZQ6 932 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 MLXIPLQ9NP71 852 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 KCND2Q9NZV8 630 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 PCDHB3Q9Y5E6 796 aa9.05□□□□□ -0.96
GARNL3-219ENST00000495172 FER1L5A0AVI2 2057 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 A6NL46 340 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 HGSO14964 777 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-219ENST00000495172 MCF2LO15068 1137 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 SPTLC2O15270 562 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 ACSL4O60488 711 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 CDC45O75419 566 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 MT-CO1P00395 513 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 CTSEP14091 401 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 TNNI1P19237 187 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 CSTF2P33240 577 aaKnown RBP eCLIP9.04□□□□□ -0.96
GARNL3-219ENST00000495172 HK3P52790 923 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 EMP3P54852 163 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 FOXD4Q12950 439 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-219ENST00000495172 HLTFQ14527 1009 aaKnown RBP eCLIP9.04□□□□□ -0.96
GARNL3-219ENST00000495172 ELOCQ15369 112 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 EDRF1Q3B7T1 1238 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 LRRC73Q5JTD7 316 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 L1TD1Q5T7N2 865 aaKnown RBP9.04□□□□□ -0.96
GARNL3-219ENST00000495172 SPOPLQ6IQ16 392 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 DUS1LQ6P1R4 473 aaKnown RBP9.04□□□□□ -0.96
GARNL3-219ENST00000495172 ERN2Q76MJ5 926 aaKnown RBP9.04□□□□□ -0.96
GARNL3-219ENST00000495172 TGIF2LYQ8IUE0 185 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 WDR49Q8IV35 697 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 APLFQ8IW19 511 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-219ENST00000495172 HJURPQ8NCD3 748 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-219ENST00000495172 AGBL5Q8NDL9 886 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 FAM46DQ8NEK8 389 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 ITLN2Q8WWU7 325 aaPredicted RBP9.04□□□□□ -0.96
GARNL3-219ENST00000495172 SCG3Q8WXD2 468 aaKnown RBP9.04□□□□□ -0.96
GARNL3-219ENST00000495172 WASF1Q92558 559 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 INPP5DQ92835 1189 aa9.04□□□□□ -0.96
GARNL3-219ENST00000495172 PNPLA2Q96AD5 504 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms