RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	RIMS3	Q9UJD0	308 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	AAR2	Q9Y312	384 aa	Known RBP	13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	SNX13	Q9Y5W8	968 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	RAD54B	Q9Y620	910 aa		13.6	□□□□□ -0.23
SUPT20H-222	ENST00000495071	hCG_2014768	A0A024R1R8	64 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ARHGAP10	A1A4S6	786 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	TFAP2A	P05549	437 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	SPATA31D3	P0C874	917 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	DPP6	P42658	865 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	NUMB	P49757	651 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PKN3	Q6P5Z2	889 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	CYP2R1	Q6VVX0	501 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	TRIM67	Q6ZTA4	783 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	SPATA31D4	Q6ZUB0	917 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	CENPL	Q8N0S6	344 aa	Predicted RBP	13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	CNTD1	Q8N815	330 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	SNX31	Q8N9S9	440 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	NTAN1	Q96AB6	310 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	TBL1Y	Q9BQ87	522 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PCDHAC1	Q9H158	963 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	WDR6	Q9NNW5	1121 aa	Known RBP	13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	NUP205	Q92621	2012 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	TRIM38	O00635	465 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	SLC22A2	O15244	555 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	STRN	O43815	780 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	TADA2A	O75478	443 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	BCAS2	O75934	225 aa	Predicted RBP	13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ADSL	P30566	484 aa	Predicted RBP	13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	GALNT2	Q10471	571 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	STX5	Q13190	355 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	OLFML2B	Q68BL8	750 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PAOX	Q6QHF9	649 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	CEP97	Q8IW35	865 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ZFP42	Q96MM3	310 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	KLHL32	Q96NJ5	620 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	LTBP3	Q9NS15	1303 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ANKRD33B	A6NCL7	494 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071		I6L893	689 aa	Predicted RBP	13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	FYN	P06241	537 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	SMPD1	P17405	629 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	NELFE	P18615	380 aa	Known RBP	13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PAM	P19021	973 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	WARS	P23381	471 aa	Known RBP	13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	AIF1	P55008	147 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	TAS2R39	P59534	338 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	CDC42EP1	Q00587	391 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	RALGDS	Q12967	914 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	GEN1	Q17RS7	908 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	IL23R	Q5VWK5	629 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	KLHDC10	Q6PID8	442 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ALKAL1	Q6UXT8	129 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PAQR9	Q6ZVX9	377 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	AMIGO2	Q86SJ2	522 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	EGFL6	Q8IUX8	553 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	CPSF7	Q8N684	471 aa	Known RBP	13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	TOP6BL	Q8N6T0	577 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	KCTD13	Q8WZ19	329 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	C1QTNF1	Q9BXJ1	281 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	ARHGEF38	Q9NXL2	777 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PTTG2	Q9NZH5	202 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	AP4S1	Q9Y587	144 aa		13.59	□□□□□ -0.23
SUPT20H-222	ENST00000495071	PSMD3	O43242	534 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	RNASEH2A	O75792	299 aa	Known RBP	13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	F9	P00740	461 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SBK3	P0C264	359 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	GABRB3	P28472	473 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	CD151	P48509	253 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	CDKL1	Q00532	357 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	PCSK7	Q16549	785 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	GPRIN1	Q7Z2K8	1008 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	PIWIL4	Q7Z3Z4	852 aa	Known RBP	13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	LSMEM2	Q8N112	164 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	PHF21B	Q96EK2	531 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	OCEL1	Q9H607	264 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ARHGEF37	A1IGU5	675 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	UBD	O15205	165 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	GPR32	O75388	356 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	PGK1	P00558	417 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	PPIL2	Q13356	520 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	FASTK	Q14296	549 aa	Known RBP	13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	HERC3	Q15034	1050 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ZNF280D	Q6N043	979 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	FAM35A	Q86V20	835 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	AHI1	Q8N157	1196 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	CCT7	Q99832	543 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	KIFC1	Q9BW19	673 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	CAAP1	Q9H8G2	361 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TBC1D30	Q9Y2I9	924 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MYBPHL	A2RUH7	354 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	TCAF2	A6NFQ2	919 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	ANXA9	O76027	345 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SMIM10L2A	P0DMW4	78 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	SMIM10L2B	P0DMW5	78 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	COL6A2	P12110	1019 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MYBPC1	Q00872	1141 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MAPRE2	Q15555	327 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	MAMDC4	Q6UXC1	1216 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	RPS27L	Q71UM5	84 aa	Known RBP	13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	KDM1B	Q8NB78	822 aa		13.58	□□□□□ -0.24
SUPT20H-222	ENST00000495071	HEXDC	Q8WVB3	486 aa		13.58	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 19 ms