RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 SLC26A9Q7LBE3 791 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 ZDHHC17Q8IUH5 632 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 RYBPQ8N488 228 aaPredicted RBP14.52□□□□□ -0.09
VARS-228ENST00000495010 OR7D4Q8NG98 312 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 CCNL2Q96S94 520 aaPredicted RBP14.52□□□□□ -0.09
VARS-228ENST00000495010 CRACR2AQ9BSW2 395 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 SLC13A1Q9BZW2 595 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 TMEM51Q9NW97 253 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 APOBEC3BQ9UH17 382 aaKnown RBP14.52□□□□□ -0.09
VARS-228ENST00000495010 KLF15Q9UIH9 416 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 PCDHGC3Q9UN70 934 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 DOLKQ9UPQ8 538 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 SSUH2Q9Y2M2 353 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 SNX10Q9Y5X0 201 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 COL6A6A6NMZ7 2263 aa14.52□□□□□ -0.09
VARS-228ENST00000495010 TRPM6Q9BX84 2022 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 ILVBLA1L0T0 632 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 IGLON5A6NGN9 336 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 DRGXA6NNA5 263 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 CDRT15L2A8MXV6 281 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 CCNHP51946 323 aaPredicted RBP14.51□□□□□ -0.09
VARS-228ENST00000495010 ADKP55263 362 aaKnown RBP14.51□□□□□ -0.09
VARS-228ENST00000495010 MARSP56192 900 aaKnown RBP14.51□□□□□ -0.09
VARS-228ENST00000495010 SKOR1P84550 965 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 DRAP1Q14919 205 aaPredicted RBP14.51□□□□□ -0.09
VARS-228ENST00000495010 PRRT3Q5FWE3 981 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 PERM1Q5SV97 790 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 FAXCQ5TGI0 409 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 ZNF783Q6ZMS7 281 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 PARS2Q7L3T8 475 aaKnown RBP14.51□□□□□ -0.09
VARS-228ENST00000495010 DENND6BQ8NEG7 585 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 ZNF397Q8NF99 534 aaPredicted RBP14.51□□□□□ -0.09
VARS-228ENST00000495010 RAB7BQ96AH8 199 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 PRR11Q96HE9 360 aaPredicted RBP14.51□□□□□ -0.09
VARS-228ENST00000495010 C1orf74Q96LT6 269 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 CCDC3Q9BQI4 270 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 ARHGAP9Q9BRR9 750 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 C1QTNF2Q9BXJ5 285 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 PDCL3Q9H2J4 239 aa14.51□□□□□ -0.09
VARS-228ENST00000495010 HECAQ9UBI9 543 aaPredicted RBP14.51□□□□□ -0.09
VARS-228ENST00000495010 FCF1Q9Y324 198 aaKnown RBP14.51□□□□□ -0.09
VARS-228ENST00000495010 CFAP46Q8IYW2 2715 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 A0A1W2PNU3 283 aaPredicted RBP14.5□□□□□ -0.09
VARS-228ENST00000495010 BECN2A8MW95 431 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 PPP1R3GB7ZBB8 358 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 SPINT1O43278 529 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 GJB6O95452 261 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 ITGA2BP08514 1039 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 KRT10P13645 584 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 EIF2B5Q13144 721 aaKnown RBP14.5□□□□□ -0.09
VARS-228ENST00000495010 PAK1Q13153 545 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 CLN3Q13286 438 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 C1orf61Q13536 156 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 ARL13BQ3SXY8 428 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 C6orf132Q5T0Z8 1188 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 TRIM65Q6PJ69 517 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 GBP6Q6ZN66 633 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 CLEC14AQ86T13 490 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 PHACTR4Q8IZ21 702 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 RBFAQ8N0V3 343 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 SCG3Q8WXD2 468 aaKnown RBP14.5□□□□□ -0.09
VARS-228ENST00000495010 ARHGEF26Q96DR7 871 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 NPY6RQ99463 290 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 KLF6Q99612 283 aaPredicted RBP14.5□□□□□ -0.09
VARS-228ENST00000495010 BOCQ9BWV1 1114 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 APEX2Q9UBZ4 518 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 PADI4Q9UM07 663 aa14.5□□□□□ -0.09
VARS-228ENST00000495010 C16orf96A6NNT2 1141 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 TMX2-CTNND1H3BSU7 103 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 ZNF821O75541 412 aaPredicted RBP14.49□□□□□ -0.09
VARS-228ENST00000495010 SLC9A1P19634 815 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 PFN3P60673 137 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 GNA12Q03113 381 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 NFATC3Q12968 1075 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 POLD3Q15054 466 aaPredicted RBP14.49□□□□□ -0.09
VARS-228ENST00000495010 PTPN20Q4JDL3 420 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 TPRG1LQ5T0D9 272 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 OTUD1Q5VV17 481 aaPredicted RBP14.49□□□□□ -0.09
VARS-228ENST00000495010 USP53Q70EK8 1073 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 JAMLQ86YT9 394 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 SLC35F3Q8IY50 421 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 DRC7Q8IY82 874 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 ZNF683Q8IZ20 524 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 FBXO39Q8N4B4 442 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 ASB12Q8WXK4 309 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 PGAP3Q96FM1 320 aaPredicted RBP14.49□□□□□ -0.09
VARS-228ENST00000495010 TBCBQ99426 244 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 C1QTNF7Q9BXJ2 289 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 TM6SF2Q9BZW4 377 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 ZYG11BQ9C0D3 744 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 STRADBQ9C0K7 418 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 EPB41L5Q9HCM4 733 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 ANLNQ9NQW6 1124 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 GULP1Q9UBP9 304 aa14.49□□□□□ -0.09
VARS-228ENST00000495010 MGAQ8IWI9 3026 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 TENM4Q6N022 2769 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 IGLV3-10A0A075B6K4 115 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 PMS2P1A4D2B8 440 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 LMO7DNF2Z398 122 aa14.48□□□□□ -0.09
VARS-228ENST00000495010 BIN1O00499 593 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms