RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 COCHO43405 550 aa10.53□□□□□ -0.72
SAMM50-206ENST00000494795 ATP6V1G2O95670 118 aa10.53□□□□□ -0.72
SAMM50-206ENST00000494795 GSTA1P08263 222 aa10.53□□□□□ -0.72
SAMM50-206ENST00000494795 SERPINB9P50453 376 aa10.53□□□□□ -0.72
SAMM50-206ENST00000494795 ALDH18A1P54886 795 aaKnown RBP10.53□□□□□ -0.72
SAMM50-206ENST00000494795 PDAP1Q13442 181 aaKnown RBP10.53□□□□□ -0.72
SAMM50-206ENST00000494795 BFSP2Q13515 415 aa10.53□□□□□ -0.72
SAMM50-206ENST00000494795 FYB2Q5VWT5 728 aa10.53□□□□□ -0.72
SAMM50-206ENST00000494795 NAPEPLDQ6IQ20 393 aa10.53□□□□□ -0.72
SAMM50-206ENST00000494795 PKN3Q6P5Z2 889 aa10.53□□□□□ -0.72
SAMM50-206ENST00000494795 ZNF512Q96ME7 567 aaPredicted RBP10.53□□□□□ -0.72
SAMM50-206ENST00000494795 ATP11BQ9Y2G3 1177 aa10.53□□□□□ -0.72
SAMM50-206ENST00000494795 HBS1LQ9Y450 684 aaKnown RBP10.53□□□□□ -0.72
SAMM50-206ENST00000494795 ZFP37Q9Y6Q3 630 aaPredicted RBP10.53□□□□□ -0.72
SAMM50-206ENST00000494795 NEMP2A6NFY4 417 aa10.52□□□□□ -0.72
SAMM50-206ENST00000494795 FCHO1O14526 889 aa10.52□□□□□ -0.72
SAMM50-206ENST00000494795 FGF10O15520 208 aaPredicted RBP10.52□□□□□ -0.72
SAMM50-206ENST00000494795 TROVE2P10155 538 aaKnown RBP eCLIP10.52□□□□□ -0.72
SAMM50-206ENST00000494795 HMGA1P17096 107 aaKnown RBP10.52□□□□□ -0.72
SAMM50-206ENST00000494795 STX3Q13277 289 aa10.52□□□□□ -0.72
SAMM50-206ENST00000494795 PTAR1Q7Z6K3 402 aaPredicted RBP10.52□□□□□ -0.72
SAMM50-206ENST00000494795 ARRDC2Q8TBH0 407 aa10.52□□□□□ -0.72
SAMM50-206ENST00000494795 TBC1D10AQ9BXI6 508 aa10.52□□□□□ -0.72
SAMM50-206ENST00000494795 OSBPL1AQ9BXW6 950 aa10.52□□□□□ -0.72
SAMM50-206ENST00000494795 TLR8Q9NR97 1041 aaKnown RBP10.52□□□□□ -0.72
SAMM50-206ENST00000494795 MARCH4Q9P2E8 410 aaPredicted RBP10.52□□□□□ -0.72
SAMM50-206ENST00000494795 COPG2Q9UBF2 871 aa10.52□□□□□ -0.72
SAMM50-206ENST00000494795 UXTQ9UBK9 157 aaPredicted RBP10.52□□□□□ -0.72
SAMM50-206ENST00000494795 RAD54BQ9Y620 910 aa10.52□□□□□ -0.72
SAMM50-206ENST00000494795 ARL5AQ9Y689 179 aa10.52□□□□□ -0.72
SAMM50-206ENST00000494795 IGLV3-27P01718 113 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 SLC4A1P02730 911 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 SLC35E2BP0CK96 405 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 MAGEA11P43364 429 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 ALDH7A1P49419 539 aaKnown RBP10.52□□□□□ -0.73
SAMM50-206ENST00000494795 SETDB1Q15047 1291 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 POLD3Q15054 466 aaPredicted RBP10.52□□□□□ -0.73
SAMM50-206ENST00000494795 TRIP4Q15650 581 aaPredicted RBP10.52□□□□□ -0.73
SAMM50-206ENST00000494795 ZNF470Q6ECI4 717 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 LINGO4Q6UY18 593 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 SLC39A5Q6ZMH5 540 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 CENPLQ8N0S6 344 aaPredicted RBP10.52□□□□□ -0.73
SAMM50-206ENST00000494795 UMODL1-AS1Q8N2C9 162 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 OR13J1Q8NGT2 312 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 MAPK15Q8TD08 544 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 AGAP11Q8TF27 550 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 BTN2A3PQ96KV6 586 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 C1orf74Q96LT6 269 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 VAT1Q99536 393 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 ZBED2Q9BTP6 218 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 ELAC1Q9H777 363 aaKnown RBP10.52□□□□□ -0.73
SAMM50-206ENST00000494795 NOD2Q9HC29 1040 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 TMEM248Q9NWD8 314 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 IGLV3-10A0A075B6K4 115 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 OR6C75A6NL08 312 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 GPR39O43194 453 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 JUNP05412 331 aaKnown RBP10.52□□□□□ -0.73
SAMM50-206ENST00000494795 SLC1A6P48664 564 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 PLD1Q13393 1074 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 GRTP1Q5TC63 336 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 MARC1Q5VT66 337 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 RAPH1Q70E73 1250 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 ZNF781Q8N8C0 355 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 TTC8Q8TAM2 541 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 NXNL1Q96CM4 212 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 OLFM1Q99784 485 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 C1QTNF1Q9BXJ1 281 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 PRDM16Q9HAZ2 1276 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 SP110Q9HB58 689 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 NKX1-2Q9UD57 310 aaPredicted RBP10.52□□□□□ -0.73
SAMM50-206ENST00000494795 TCAF1Q9Y4C2 921 aa10.52□□□□□ -0.73
SAMM50-206ENST00000494795 MTSS1O43312 755 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 NEBLO76041 1014 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 SORBS2O94875 1100 aaKnown RBP10.51□□□□□ -0.73
SAMM50-206ENST00000494795 ZDHHC11BP0C7U3 371 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 RHOQP17081 205 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 TACR2P21452 398 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 MAGEA12P43365 314 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 NPY2RP49146 381 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 ZBTB16Q05516 673 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 PRPSAP1Q14558 356 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 USP10Q14694 798 aaKnown RBP10.51□□□□□ -0.73
SAMM50-206ENST00000494795 ACCSLQ4AC99 568 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 FSCBQ5H9T9 825 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 PCID2Q5JVF3 399 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 SIRPB2Q5JXA9 342 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 SPOUT1Q5T280 376 aaKnown RBP10.51□□□□□ -0.73
SAMM50-206ENST00000494795 CLEC14AQ86T13 490 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 GPATCH11Q8N954 259 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 PPP1R14CQ8TAE6 165 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 IMP4Q96G21 291 aaKnown RBP10.51□□□□□ -0.73
SAMM50-206ENST00000494795 IGSF21Q96ID5 467 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 CLPTM1LQ96KA5 538 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 SEMA3CQ99985 751 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 SPON2Q9BUD6 331 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 CYP4F11Q9HBI6 524 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 TREX1Q9NSU2 369 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 MKS1Q9NXB0 559 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 MIA3Q5JRA6 1907 aa10.51□□□□□ -0.73
SAMM50-206ENST00000494795 ZNF840PA6NDX5 716 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms