RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 TTC31Q49AM3 519 aaPredicted RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 INO80DQ53TQ3 878 aaPredicted RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 TMCO4Q5TGY1 634 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 OR14C36Q8NHC7 312 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 P3H4Q92791 437 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 ARRDC3Q96B67 414 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 CALR3Q96L12 384 aaKnown RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 NSMCE3Q96MG7 304 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 GDAP1L1Q96MZ0 367 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 HINFPQ9BQA5 517 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 HEPHQ9BQS7 1158 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 KCNH6Q9H252 994 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 SMOC1Q9H4F8 434 aa11.29□□□□□ -0.6
APTX-230ENST00000494649 SMG5Q9UPR3 1016 aaKnown RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 ZFHX2Q9C0A1 2572 aaPredicted RBP11.29□□□□□ -0.6
APTX-230ENST00000494649 NDUFS2O75306 463 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 ZNF217O75362 1048 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 IGSF6O95976 241 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 PRKCGP05129 697 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 CD6P30203 668 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 NBL1P41271 181 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 MMP13P45452 471 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 TAZQ16635 292 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 MYLK3Q32MK0 819 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 PLK5Q496M5 336 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 ZNF569Q5MCW4 686 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 MEI1Q5TIA1 1274 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 MARC1Q5VT66 337 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 ASCL5Q7RTU5 278 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 DSG4Q86SJ6 1040 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 CAMK1DQ8IU85 385 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 DCLK2Q8N568 766 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 PAF1Q8N7H5 531 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 NSMCE1Q8WV22 266 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 SNX19Q92543 992 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 NKD2Q969F2 451 aaPredicted RBP11.28□□□□□ -0.6
APTX-230ENST00000494649 KLHL32Q96NJ5 620 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 DUSP15Q9H1R2 295 aaPredicted RBP11.28□□□□□ -0.6
APTX-230ENST00000494649 C6orf106Q9H6K1 298 aaPredicted RBP11.28□□□□□ -0.6
APTX-230ENST00000494649 MIF4GDA9UHW6 222 aaKnown RBP11.28□□□□□ -0.6
APTX-230ENST00000494649 C1QTNF3-AMACRE9PGA6 284 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 KCNK3O14649 394 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 ZSCAN12O43309 604 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 NEBLO76041 1014 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 ADH1BP00325 375 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 CCNB1P14635 433 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 ITIH2P19823 946 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 C5AR1P21730 350 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 VASPP50552 380 aaPredicted RBP11.28□□□□□ -0.6
APTX-230ENST00000494649 CREB5Q02930 508 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 ZBTB17Q13105 803 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 TFDP2Q14188 446 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 RPS6KA1Q15418 735 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 ZNF662Q6ZS27 426 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 CCDC13Q8IYE1 715 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 TRIM58Q8NG06 486 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 PDCD6IPQ8WUM4 868 aaKnown RBP11.28□□□□□ -0.6
APTX-230ENST00000494649 VOPP1Q96AW1 172 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 HSPA12BQ96MM6 686 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 AGAP3Q96P47 875 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 BTBD1Q9H0C5 482 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 EPC1Q9H2F5 836 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 DYRK4Q9NR20 520 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 RBM22Q9NW64 420 aaKnown RBP eCLIP11.28□□□□□ -0.6
APTX-230ENST00000494649 WSB2Q9NYS7 404 aaPredicted RBP11.28□□□□□ -0.6
APTX-230ENST00000494649 SEPT3Q9UH03 358 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 ITM2BQ9Y287 266 aa11.28□□□□□ -0.6
APTX-230ENST00000494649 THADAQ6YHU6 1953 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 GOLGA8CPA6NN73 597 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 GSRP00390 522 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 JCHAINP01591 159 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 PRNPP04156 253 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 HLA-DQB2P05538 268 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 ZFXP17010 805 aaPredicted RBP11.27□□□□□ -0.61
APTX-230ENST00000494649 MX2P20592 715 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 MAT2AP31153 395 aaKnown RBP11.27□□□□□ -0.61
APTX-230ENST00000494649 OTUD4Q01804 1114 aaKnown RBP11.27□□□□□ -0.61
APTX-230ENST00000494649 PPP2R5EQ16537 467 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 NCEH1Q6PIU2 408 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 SLC41A1Q8IVJ1 513 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 SLC35F6Q8N357 371 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 SUMF1Q8NBK3 374 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 ACTL9Q8TC94 416 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 ISG20Q96AZ6 181 aaKnown RBP11.27□□□□□ -0.61
APTX-230ENST00000494649 HDAC11Q96DB2 347 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 OLFM3Q96PB7 478 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 TLR10Q9BXR5 811 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 IRF2BPLQ9H1B7 796 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 MIR1-1HGQ9H1L0 117 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 FBRSQ9HAH7 460 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 GGT7Q9UJ14 662 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 RAB23Q9ULC3 237 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 NCKAP1Q9Y2A7 1128 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 PCDHGC4Q9Y5F7 938 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 SLCO1B1Q9Y6L6 691 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 FANCMQ8IYD8 2048 aa11.27□□□□□ -0.61
APTX-230ENST00000494649 CFAP54Q96N23 3096 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TBC1D3DA0A087WVF3 549 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TBC1D3IA0A087WXS9 549 aa11.26□□□□□ -0.61
APTX-230ENST00000494649 TBC1D3EA0A087X179 549 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms