RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 LRRC53A6NM62 1247 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 C16orf96A6NNT2 1141 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 KRIT1O00522 736 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 ATMINO43313 823 aaPredicted RBP9.76□□□□□ -0.85
MSH5-218ENST00000494646 MAGEC1O60732 1142 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 CAPNS1P04632 268 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 SKILP12757 684 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 ADRB3P13945 408 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 ITIH2P19823 946 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 EPHA8P29322 1005 aaPredicted RBP9.76□□□□□ -0.85
MSH5-218ENST00000494646 NUDT1P36639 197 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 RXRGP48443 463 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 NEK3P51956 506 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 MYLK3Q32MK0 819 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 INAVAQ3KP66 663 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 ZNF542PQ5EBM4 170 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 EFHC2Q5JST6 749 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 PPP1R15BQ5SWA1 713 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 NEK5Q6P3R8 708 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 PARS2Q7L3T8 475 aaKnown RBP9.76□□□□□ -0.85
MSH5-218ENST00000494646 ZNF571Q7Z3V5 609 aaPredicted RBP9.76□□□□□ -0.85
MSH5-218ENST00000494646 IQCHQ86VS3 1027 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 OR13H1Q8NG92 308 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 MDM1Q8TC05 714 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 NTAN1Q96AB6 310 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 PPP1R16AQ96I34 528 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 BMFQ96LC9 184 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 KLHL32Q96NJ5 620 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 BPIFA3Q9BQP9 254 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 CNPY3Q9BT09 278 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 NOL6Q9H6R4 1146 aaKnown RBP9.76□□□□□ -0.85
MSH5-218ENST00000494646 ERVMER34-1Q9H9K5 563 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 GPATCH2LQ9NWQ4 482 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 PCSK1NQ9UHG2 260 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 NEU3Q9UQ49 428 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 FADS3Q9Y5Q0 445 aa9.76□□□□□ -0.85
MSH5-218ENST00000494646 TMEM8BA6NDV4 472 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 TRABD2BA6NFA1 517 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 IGLON5A6NGN9 336 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 RASA4BC9J798 803 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 RASA4O43374 803 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 DKK1O94907 266 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 POP4O95707 220 aaKnown RBP9.75□□□□□ -0.85
MSH5-218ENST00000494646 SERPINC1P01008 464 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 FTLP02792 175 aaPredicted RBP9.75□□□□□ -0.85
MSH5-218ENST00000494646 UGT2B4P06133 528 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 HNRNPA2B1P22626 353 aaKnown RBP9.75□□□□□ -0.85
MSH5-218ENST00000494646 PSMA2P25787 234 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 ITGB7P26010 798 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 AKT2P31751 481 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 ETFBP38117 255 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 ABL2P42684 1182 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 ZNF165P49910 485 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 SNRPD1P62314 119 aaKnown RBP9.75□□□□□ -0.85
MSH5-218ENST00000494646 MAMLD1Q13495 774 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 FGL2Q14314 439 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 NR1I3Q14994 352 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 IQCB1Q15051 598 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 CYTH1Q15438 398 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 ASIC2Q16515 512 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 CA9Q16790 459 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 LRRC73Q5JTD7 316 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 SFMBT2Q5VUG0 894 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 Q6ZSR6 202 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 TMC6Q7Z403 805 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 TTC7BQ86TV6 843 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 SLC25A45Q8N413 288 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 OXR1Q8N573 874 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 RTL3Q8N8U3 475 aaKnown RBP9.75□□□□□ -0.85
MSH5-218ENST00000494646 OR2AP1Q8NGE2 309 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 ISG20Q96AZ6 181 aaKnown RBP9.75□□□□□ -0.85
MSH5-218ENST00000494646 HMCESQ96FZ2 354 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 SYT11Q9BT88 431 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 DHX35Q9H5Z1 703 aaKnown RBP9.75□□□□□ -0.85
MSH5-218ENST00000494646 CCDC86Q9H6F5 360 aaKnown RBP9.75□□□□□ -0.85
MSH5-218ENST00000494646 RETREG1Q9H6L5 497 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 PARVAQ9NVD7 372 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 UCKL1Q9NWZ5 548 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 MYO1AQ9UBC5 1043 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 GGT7Q9UJ14 662 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 ITM2BQ9Y287 266 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 HS3ST3A1Q9Y663 406 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 ADAMTS20P59510 1910 aa9.75□□□□□ -0.85
MSH5-218ENST00000494646 URB1O60287 2271 aaKnown RBP9.75□□□□□ -0.85
MSH5-218ENST00000494646 COL5A1P20908 1838 aaPredicted RBP9.75□□□□□ -0.85
MSH5-218ENST00000494646 SHROOM3Q8TF72 1996 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 POM121BA6NF01 834 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 J3KR12 359 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 TRIM38O00635 465 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 NEMP1O14524 444 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 RAD51BO15315 384 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 YKT6O15498 198 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 INSIG1O15503 277 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 FFAR2O15552 330 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 SIGLEC6O43699 453 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 MMP20O60882 483 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 TMCC1O94876 653 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 MYF5P13349 255 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 JUPP14923 745 aa9.74□□□□□ -0.85
MSH5-218ENST00000494646 GEMIN4P57678 1058 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms