RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 COL6A6A6NMZ7 2263 aa9.81□□□□□ -0.84
UBR4-216ENST00000494503 ILVBLA1L0T0 632 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 ERVH48-1M5A8F1 160 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 AGRPO00253 132 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 CSF2P04141 144 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 UGT2B4P06133 528 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 NME1P15531 152 aaKnown RBP9.8□□□□□ -0.84
UBR4-216ENST00000494503 TGM2P21980 687 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 XPAP23025 273 aaPredicted RBP9.8□□□□□ -0.84
UBR4-216ENST00000494503 CLCN1P35523 988 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 FLT3P36888 993 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 LSSP48449 732 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 RPIAP49247 311 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 ARF5P84085 180 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 LY6DQ14210 128 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 FGL2Q14314 439 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 ARL13BQ3SXY8 428 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 C5orf22Q49AR2 442 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 TMEM259Q4ZIN3 620 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 PRRT3Q5FWE3 981 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 FAXCQ5TGI0 409 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 NAA35Q5VZE5 725 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 RBM44Q6ZP01 1051 aaKnown RBP9.8□□□□□ -0.84
UBR4-216ENST00000494503 FAM114A1Q8IWE2 563 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 RBFAQ8N0V3 343 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 CACTIN-AS1Q8N1I8 211 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 EMC1Q8N766 993 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 PAF1Q8N7H5 531 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 ZNF397Q8NF99 534 aaPredicted RBP9.8□□□□□ -0.84
UBR4-216ENST00000494503 FAM174AQ8TBP5 190 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 CXorf40AQ8TE69 158 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 CPA5Q8WXQ8 436 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 GLMNQ92990 594 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 IFT43Q96FT9 208 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 BMFQ96LC9 184 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 SLC13A1Q9BZW2 595 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 CEP44Q9C0F1 390 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 USP29Q9HBJ7 922 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 METTL5Q9NRN9 209 aaKnown RBP9.8□□□□□ -0.84
UBR4-216ENST00000494503 NCKIPSDQ9NZQ3 722 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 SIRPGQ9P1W8 387 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 SPASTQ9UBP0 616 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 GULP1Q9UBP9 304 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 GGT7Q9UJ14 662 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 HS3ST3A1Q9Y663 406 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 CHD5Q8TDI0 1954 aa9.8□□□□□ -0.84
UBR4-216ENST00000494503 PIEZO2Q9H5I5 2752 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 SPTY2D1-AS1A0A0U1RR47 76 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 GTPBP10A4D1E9 387 aaKnown RBP9.79□□□□□ -0.84
UBR4-216ENST00000494503 DRGXA6NNA5 263 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 C16orf96A6NNT2 1141 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 PYCARD-AS1I3L0S3 204 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 I6L893 689 aaPredicted RBP9.79□□□□□ -0.84
UBR4-216ENST00000494503 TSPAN6O43657 245 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 ANXA6P08133 673 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 GIMD1P0DJR0 217 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 CYP11B1P15538 503 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 ACVRL1P37023 503 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 ETFBP38117 255 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 ABL2P42684 1182 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 ADKP55263 362 aaKnown RBP9.79□□□□□ -0.84
UBR4-216ENST00000494503 ERVPABLB-1P60509 514 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 SNRPD1P62314 119 aaKnown RBP9.79□□□□□ -0.84
UBR4-216ENST00000494503 RHDQ02161 417 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 SLC20A2Q08357 652 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 SPIDRQ14159 915 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 PTK2BQ14289 1009 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 MAN2A1Q16706 1144 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 ISXQ2M1V0 245 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 ATXN7L2Q5T6C5 722 aaPredicted RBP9.79□□□□□ -0.84
UBR4-216ENST00000494503 ACBD5Q5T8D3 534 aaPredicted RBP9.79□□□□□ -0.84
UBR4-216ENST00000494503 CDCP2Q5VXM1 449 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 ZNF783Q6ZMS7 281 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 XYLT1Q86Y38 959 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 JAMLQ86YT9 394 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 PHACTR4Q8IZ21 702 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 ARL14Q8N4G2 192 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 FAM181AQ8N9Y4 354 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 LSM14AQ8ND56 463 aaKnown RBP9.79□□□□□ -0.84
UBR4-216ENST00000494503 BTN2A2Q8WVV5 523 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 ARHGEF26Q96DR7 871 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 C1orf74Q96LT6 269 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 KLHL32Q96NJ5 620 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 NCAPGQ9BPX3 1015 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 WRAP53Q9BUR4 548 aaKnown RBP9.79□□□□□ -0.84
UBR4-216ENST00000494503 C1QTNF7Q9BXJ2 289 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 KIAA1468Q9P260 1216 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 FHOD1Q9Y613 1164 aa9.79□□□□□ -0.84
UBR4-216ENST00000494503 ATMQ13315 3056 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 LY6G6EA0A0G2JKS1 128 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 CAPN8A6NHC0 703 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 J3QKU1 62 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 SPINT1O43278 529 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 BUB1O43683 1085 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 MMP20O60882 483 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 RAMP2O60895 175 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 TNFSF15O95150 251 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 KRT10P13645 584 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 CTSEP14091 401 aa9.78□□□□□ -0.84
UBR4-216ENST00000494503 SDC4P31431 198 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms