RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 MRPL44Q9H9J2 332 aaKnown RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 PREBQ9HCU5 417 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 SMYD2Q9NRG4 433 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 TMEM248Q9NWD8 314 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 WWOXQ9NZC7 414 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 ORC3Q9UBD5 711 aaPredicted RBP2.55□□□□□ -2
LMNB1-207ENST00000494185 IL36RNQ9UBH0 155 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 TBX20Q9UMR3 447 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 PCDHA12Q9UN75 941 aa2.55□□□□□ -2
LMNB1-207ENST00000494185 TMEM272A0A1B0GTI8 110 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 OR6C68A6NDL8 312 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 PGPEP1LA6NFU8 196 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 CD8B2A6NJW9 211 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 OR6C75A6NL08 312 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 MS4A18H0YCH9 400 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 CCER2I3L3R5 266 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 PEX12O00623 359 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 KLK10O43240 276 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 DHX16O60231 1041 aaKnown RBP2.54□□□□□ -2
LMNB1-207ENST00000494185 ZBED4O75132 1171 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 NEURL1O76050 574 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 RTN3O95197 1032 aaPredicted RBP2.54□□□□□ -2
LMNB1-207ENST00000494185 FCGR2AP12318 317 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 ATP1A3P13637 1013 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 ARSAP15289 507 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 CD58P19256 250 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 CHMP24386 653 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 TKTP29401 623 aaKnown RBP2.54□□□□□ -2
LMNB1-207ENST00000494185 GJC1P36383 396 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 MLH1P40692 756 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 RAD52P43351 418 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 ZP1P60852 638 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 YWHAZP63104 245 aaKnown RBP2.54□□□□□ -2
LMNB1-207ENST00000494185 ZBTB16Q05516 673 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 GPR18Q14330 331 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 BAK1Q16611 211 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 MEA1Q16626 185 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 CCDC96Q2M329 555 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 EFHC1Q5JVL4 640 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 WDR45BQ5MNZ6 344 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 CCDC30Q5VVM6 783 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 ATG16L1Q676U5 607 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 AWAT2Q6E213 333 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 ITPRIPL1Q6GPH6 555 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 ACAD10Q6JQN1 1059 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 HEPHL1Q6MZM0 1159 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 KLHL24Q6TFL4 600 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 RRM2BQ7LG56 351 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 WDR5BQ86VZ2 330 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 FAM217AQ8IXS0 508 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 OR8H2Q8N162 312 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 FBXL14Q8N1E6 418 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 TCP11L2Q8N4U5 519 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 TMEM217Q8N7C4 229 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 SCAIQ8N9R8 606 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 TDRD7Q8NHU6 1098 aaKnown RBP2.54□□□□□ -2
LMNB1-207ENST00000494185 GABPB2Q8TAK5 448 aaPredicted RBP2.54□□□□□ -2
LMNB1-207ENST00000494185 TMEM163Q8TC26 289 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 TBC1D22AQ8WUA7 517 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 ST8SIA4Q92187 359 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 STAMQ92783 540 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 KAT2AQ92830 837 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 EME1Q96AY2 570 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 RRP36Q96EU6 259 aaKnown RBP2.54□□□□□ -2
LMNB1-207ENST00000494185 VCPIP1Q96JH7 1222 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 MEIS3Q99687 375 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 NUDT16L1Q9BRJ7 211 aaKnown RBP2.54□□□□□ -2
LMNB1-207ENST00000494185 SEZ6LQ9BYH1 1024 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 FRMD8Q9BZ67 464 aaPredicted RBP2.54□□□□□ -2
LMNB1-207ENST00000494185 B3GNT4Q9C0J1 378 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 CTDSP1Q9GZU7 261 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 LMAN2LQ9H0V9 348 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 HIPK3Q9H422 1215 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 STN1Q9H668 368 aaKnown RBP2.54□□□□□ -2
LMNB1-207ENST00000494185 TTC12Q9H892 705 aaPredicted RBP2.54□□□□□ -2
LMNB1-207ENST00000494185 ZNF304Q9HCX3 659 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 Q9N2J8 555 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 IRAK4Q9NWZ3 460 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 UPB1Q9UBR1 384 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 AASSQ9UDR5 926 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 CD207Q9UJ71 328 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 CNPY2Q9Y2B0 182 aa2.54□□□□□ -2
LMNB1-207ENST00000494185 SETD1BQ9UPS6 1966 aaKnown RBP2.53□□□□□ -2
LMNB1-207ENST00000494185 A0A1W2PPH5 198 aa2.53□□□□□ -2
LMNB1-207ENST00000494185 FSD2A1L4K1 749 aa2.53□□□□□ -2
LMNB1-207ENST00000494185 PI4KAP2A4QPH2 592 aa2.53□□□□□ -2
LMNB1-207ENST00000494185 H0YGN5 161 aa2.53□□□□□ -2
LMNB1-207ENST00000494185 PLOD3O60568 738 aa2.53□□□□□ -2
LMNB1-207ENST00000494185 USO1O60763 962 aaKnown RBP2.53□□□□□ -2
LMNB1-207ENST00000494185 GFPT2O94808 682 aa2.53□□□□□ -2
LMNB1-207ENST00000494185 CBX6O95503 412 aa2.53□□□□□ -2
LMNB1-207ENST00000494185 SCGB1D1O95968 90 aa2.53□□□□□ -2
LMNB1-207ENST00000494185 HOXC6P09630 235 aa2.53□□□□□ -2
LMNB1-207ENST00000494185 HNRNPA1P09651 372 aaKnown RBP eCLIP2.53□□□□□ -2
LMNB1-207ENST00000494185 UNGP13051 313 aaPredicted RBP2.53□□□□□ -2
LMNB1-207ENST00000494185 HOXD3P31249 432 aaPredicted RBP2.53□□□□□ -2
LMNB1-207ENST00000494185 PSMC2P35998 433 aaKnown RBP2.53□□□□□ -2
LMNB1-207ENST00000494185 RFX2P48378 723 aa2.53□□□□□ -2
LMNB1-207ENST00000494185 BLKP51451 505 aa2.53□□□□□ -2
LMNB1-207ENST00000494185 DRG2P55039 364 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms