RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 IFT80Q9P2H3 777 aaPredicted RBP4.54□□□□□ -1.68
ITGB1-216ENST00000493758 NLKQ9UBE8 527 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 GJD2Q9UKL4 321 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 INSL5Q9Y5Q6 135 aa4.54□□□□□ -1.68
ITGB1-216ENST00000493758 IGHV4-28A0A0C4DH34 117 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 TARSL2A2RTX5 802 aaKnown RBP4.53□□□□□ -1.68
ITGB1-216ENST00000493758 EME2A4GXA9 379 aaPredicted RBP4.53□□□□□ -1.68
ITGB1-216ENST00000493758 SH2D7A6NKC9 451 aaPredicted RBP4.53□□□□□ -1.68
ITGB1-216ENST00000493758 EYA2O00167 538 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 KLK10O43240 276 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 ANP32CO43423 234 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 WEE2P0C1S8 567 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 TTKP33981 857 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 RFC1P35251 1148 aaPredicted RBP4.53□□□□□ -1.68
ITGB1-216ENST00000493758 GPD2P43304 727 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 ARSFP54793 590 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 TLE2Q04725 743 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 TRAF2Q12933 501 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 FNBP1LQ5T0N5 605 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 KIAA1161Q6NSJ0 714 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 CYP26C1Q6V0L0 522 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 TRILQ7L0X0 811 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 ZNF367Q7RTV3 350 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 DENND6AQ8IWF6 608 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 FAM216AQ8WUB2 273 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 TRIM63Q969Q1 353 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 CD180Q99467 661 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 MSTO1Q9BUK6 570 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 PHF7Q9BWX1 381 aaPredicted RBP4.53□□□□□ -1.68
ITGB1-216ENST00000493758 TAOK3Q9H2K8 898 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 TMEM160Q9NX00 188 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 PTGDR2Q9Y5Y4 395 aa4.53□□□□□ -1.68
ITGB1-216ENST00000493758 A0A1B0GVT2 93 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 PEX12O00623 359 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 ASAP2O43150 1006 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 LIASO43766 372 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 CBX6O95503 412 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 GLUD1P00367 558 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 MYF6P23409 242 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 PSMC2P35998 433 aaKnown RBP4.52□□□□□ -1.69
ITGB1-216ENST00000493758 THPOP40225 353 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 AMTP48728 403 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 GLUD2P49448 558 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 NUDT6P53370 316 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 LTBQ06643 244 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.52□□□□□ -1.69
ITGB1-216ENST00000493758 KEAP1Q14145 624 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 TDRD12Q587J7 1177 aaKnown RBP4.52□□□□□ -1.69
ITGB1-216ENST00000493758 DCAF6Q58WW2 860 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 FSCBQ5H9T9 825 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 ATG16L1Q676U5 607 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 RETSATQ6NUM9 610 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 RBM23Q86U06 439 aaKnown RBP4.52□□□□□ -1.69
ITGB1-216ENST00000493758 GHDCQ8N2G8 530 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 HSPH1Q92598 858 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 CNOT9Q92600 299 aaKnown RBP4.52□□□□□ -1.69
ITGB1-216ENST00000493758 ZPBPQ9BS86 351 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 MVB12BQ9H7P6 319 aa4.52□□□□□ -1.69
ITGB1-216ENST00000493758 SPATS2LQ9NUQ6 558 aaKnown RBP4.52□□□□□ -1.69
ITGB1-216ENST00000493758 AGO1Q9UL18 857 aaKnown RBP4.52□□□□□ -1.69
ITGB1-216ENST00000493758 EIF3FO00303 357 aaPredicted RBP4.51□□□□□ -1.69
ITGB1-216ENST00000493758 SLC28A2O43868 658 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 IL1AP01583 271 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 CKMT1AP12532 417 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 RYKP34925 604 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 TMPRSS3P57727 454 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 SLC12A1Q13621 1099 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 TMEM95Q3KNT9 176 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 PLEKHO1Q53GL0 409 aaPredicted RBP4.51□□□□□ -1.69
ITGB1-216ENST00000493758 EFHC1Q5JVL4 640 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 PRSS45Q7RTY3 260 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.51□□□□□ -1.69
ITGB1-216ENST00000493758 CPXM2Q8N436 756 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 ADAMTS14Q8WXS8 1223 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 RNF183Q96D59 192 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 FAM84BQ96KN1 310 aaPredicted RBP4.51□□□□□ -1.69
ITGB1-216ENST00000493758 GFM1Q96RP9 751 aaKnown RBP4.51□□□□□ -1.69
ITGB1-216ENST00000493758 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.51□□□□□ -1.69
ITGB1-216ENST00000493758 NPFFR1Q9GZQ6 430 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 RIC8AQ9NPQ8 531 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 ANKRD10Q9NXR5 420 aa4.51□□□□□ -1.69
ITGB1-216ENST00000493758 GAGE10A6NGK3 116 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 C4orf47A7E2U8 309 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 GTPBP1O00178 669 aaKnown RBP4.5□□□□□ -1.69
ITGB1-216ENST00000493758 WNT9BO14905 357 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 PER2O15055 1255 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 GUCY1B2O75343 617 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 NAGAP17050 411 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 PTPN2P17706 415 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 HOXA11P31270 313 aaPredicted RBP4.5□□□□□ -1.69
ITGB1-216ENST00000493758 SEC61A1P61619 476 aaKnown RBP4.5□□□□□ -1.69
ITGB1-216ENST00000493758 ATG9BQ674R7 924 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 IL20RBQ6UXL0 311 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 MON1BQ7L1V2 547 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 BHLHA9Q7RTU4 235 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 SFTPA2Q8IWL1 248 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 CLIP4Q8N3C7 705 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 NEXN-AS1Q8NBZ9 246 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 MORC4Q8TE76 937 aa4.5□□□□□ -1.69
ITGB1-216ENST00000493758 TBC1D22AQ8WUA7 517 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms