RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 F9P00740 461 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 PON1P27169 355 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 CLCN1P35523 988 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 DRAP1Q14919 205 aaPredicted RBP12.56□□□□□ -0.4
SAMM50-205ENST00000493621 NR0B2Q15466 257 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 FOXR1Q6PIV2 292 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 ZNF783Q6ZMS7 281 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 TTC9Q92623 222 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 NT5C3BQ969T7 300 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 PGAP3Q96FM1 320 aaPredicted RBP12.56□□□□□ -0.4
SAMM50-205ENST00000493621 C1orf74Q96LT6 269 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 KLF6Q99612 283 aaPredicted RBP12.56□□□□□ -0.4
SAMM50-205ENST00000493621 IL12RB2Q99665 862 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 NCKIPSDQ9NZQ3 722 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 SALL4Q9UJQ4 1053 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 ENTPD2Q9Y5L3 495 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 ACTL7AQ9Y615 435 aa12.56□□□□□ -0.4
SAMM50-205ENST00000493621 PMS2P1A4D2B8 440 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 EME2A4GXA9 379 aaPredicted RBP12.55□□□□□ -0.4
SAMM50-205ENST00000493621 FOXN3O00409 490 aaPredicted RBP12.55□□□□□ -0.4
SAMM50-205ENST00000493621 NEMP1O14524 444 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 MUSKO15146 869 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 SPINT1O43278 529 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 GKP32189 559 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 ABL2P42684 1182 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 ARF5P84085 180 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 GNA12Q03113 381 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 SLC20A2Q08357 652 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 EIF2B5Q13144 721 aaKnown RBP12.55□□□□□ -0.4
SAMM50-205ENST00000493621 SLC25A52Q3SY17 297 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 PERM1Q5SV97 790 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 ARTNQ5T4W7 220 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 FAM102AQ5T9C2 384 aaPredicted RBP12.55□□□□□ -0.4
SAMM50-205ENST00000493621 IGF2-ASQ6U949 168 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 RBM44Q6ZP01 1051 aaKnown RBP12.55□□□□□ -0.4
SAMM50-205ENST00000493621 DRC7Q8IY82 874 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 RBFAQ8N0V3 343 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 RYBPQ8N488 228 aaPredicted RBP12.55□□□□□ -0.4
SAMM50-205ENST00000493621 TMEM35BQ8NCS4 154 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 OR6K2Q8NGY2 324 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 PRR11Q96HE9 360 aaPredicted RBP12.55□□□□□ -0.4
SAMM50-205ENST00000493621 SLC46A1Q96NT5 459 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 LENG8Q96PV6 779 aaPredicted RBP12.55□□□□□ -0.4
SAMM50-205ENST00000493621 C1QTNF2Q9BXJ5 285 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 TM6SF2Q9BZW4 377 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 ZYG11BQ9C0D3 744 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 PDCL3Q9H2J4 239 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 TCEAL2Q9H3H9 227 aaPredicted RBP12.55□□□□□ -0.4
SAMM50-205ENST00000493621 SIX2Q9NPC8 291 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 HECAQ9UBI9 543 aaPredicted RBP12.55□□□□□ -0.4
SAMM50-205ENST00000493621 ZNF212Q9UDV6 495 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 GGT7Q9UJ14 662 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 DNAJC12Q9UKB3 198 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 ITM2BQ9Y287 266 aa12.55□□□□□ -0.4
SAMM50-205ENST00000493621 GTPBP10A4D1E9 387 aaKnown RBP12.54□□□□□ -0.4
SAMM50-205ENST00000493621 C16orf96A6NNT2 1141 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 PYCARD-AS1I3L0S3 204 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 TPP1O14773 563 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 CASC3O15234 703 aaKnown RBP12.54□□□□□ -0.4
SAMM50-205ENST00000493621 TSPAN6O43657 245 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 C6P13671 934 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 THOP1P52888 689 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 ADKP55263 362 aaKnown RBP12.54□□□□□ -0.4
SAMM50-205ENST00000493621 PFN3P60673 137 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 C1orf61Q13536 156 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 ACBD5Q5T8D3 534 aaPredicted RBP12.54□□□□□ -0.4
SAMM50-205ENST00000493621 KIAA1614Q5VZ46 1190 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 ZSCAN30Q86W11 494 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 XYLT1Q86Y38 959 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 TPCN2Q8NHX9 752 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 SNRNP27Q8WVK2 155 aaKnown RBP12.54□□□□□ -0.4
SAMM50-205ENST00000493621 BTN2A2Q8WVV5 523 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 GLMNQ92990 594 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 GRAMD1AQ96CP6 724 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 C18orf8Q96DM3 657 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 CCDC97Q96F63 343 aaPredicted RBP12.54□□□□□ -0.4
SAMM50-205ENST00000493621 HAPLN3Q96S86 360 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 BOCQ9BWV1 1114 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 SYNDIG1Q9H7V2 258 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 SPASTQ9UBP0 616 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 APOBEC3BQ9UH17 382 aaKnown RBP12.54□□□□□ -0.4
SAMM50-205ENST00000493621 RWDD2AQ9UIY3 292 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 SSUH2Q9Y2M2 353 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 PCDHGA8Q9Y5G5 932 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 LRRK1Q38SD2 2015 aa12.54□□□□□ -0.4
SAMM50-205ENST00000493621 CDRT15L2A8MXV6 281 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 B8ZZF3 427 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 GOLGA8SH3BPF8 625 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 K7ENP7 123 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 RIOK3O14730 519 aaKnown RBP12.53□□□□□ -0.4
SAMM50-205ENST00000493621 GCATO75600 419 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 TCEA3O75764 348 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 TNFSF15O95150 251 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 CD160O95971 181 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 ANXA6P08133 673 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 FLT3P36888 993 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 ACVRL1P37023 503 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 SCNN1AP37088 669 aa12.53□□□□□ -0.4
SAMM50-205ENST00000493621 MTIF2P46199 727 aaKnown RBP12.53□□□□□ -0.4
SAMM50-205ENST00000493621 GABRB2P47870 512 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms