RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 IRF6O14896 467 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 TSPAN19P0C672 248 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 TIMM50Q3ZCQ8 353 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 FOXR2Q6PJQ5 311 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 GPR142Q7Z601 462 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 FAM20CQ8IXL6 584 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 ULK2Q8IYT8 1036 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 RPS6KA6Q9UK32 745 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 DERAQ9Y315 318 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 TBL1XO60907 577 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 ZNF24P17028 368 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 CASP5P51878 434 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 FKBP1BP68106 108 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 BIKQ13323 160 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 UNC5AQ6ZN44 842 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 CACUL1Q86Y37 369 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 SLC41A1Q8IVJ1 513 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 POP5Q969H6 163 aaKnown RBP16.47■□□□□ 0.23
BRAT1-206ENST00000493232 SPACA7Q96KW9 195 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 LRRC19Q9H756 370 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 DEPDC5O75140 1603 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 OR6C75A6NL08 312 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 ZSCAN5DPP0CG00 497 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 FAM46CQ5VWP2 391 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 TXNDC11Q6PKC3 985 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 ADAMTSL2Q86TH1 951 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 CXorf40BQ96DE9 158 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 ARMCX1Q9P291 453 aa16.47■□□□□ 0.23
BRAT1-206ENST00000493232 URADA6NGE7 173 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 ASGR1P07306 291 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 RPL22P35268 128 aaKnown RBP16.46■□□□□ 0.23
BRAT1-206ENST00000493232 CCR4P51679 360 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 PFKPQ01813 784 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 SP3Q02447 781 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 RAET1GQ6H3X3 334 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 NPNTQ6UXI9 565 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 LRRC74BQ6ZQY2 392 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 ARCQ7LC44 396 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 CENPIQ92674 756 aaPredicted RBP16.46■□□□□ 0.23
BRAT1-206ENST00000493232 MIEF2Q96C03 454 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 NMD3Q96D46 503 aaKnown RBP16.46■□□□□ 0.23
BRAT1-206ENST00000493232 TEKT5Q96M29 485 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 LEF1Q9UJU2 399 aaPredicted RBP16.46■□□□□ 0.23
BRAT1-206ENST00000493232 ZNF510Q9Y2H8 683 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 ADGRB1O14514 1584 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 SLC28A1O00337 649 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 AMD1P17707 334 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 TOP3AQ13472 1001 aaPredicted RBP16.46■□□□□ 0.23
BRAT1-206ENST00000493232 SERPINA13PQ6UXR4 307 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 AGMOQ6ZNB7 445 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 SH3BP5LQ7L8J4 393 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 DENND1CQ8IV53 801 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 ZCCHC7Q8N3Z6 543 aaKnown RBP16.46■□□□□ 0.23
BRAT1-206ENST00000493232 SNRNP27Q8WVK2 155 aaKnown RBP16.46■□□□□ 0.23
BRAT1-206ENST00000493232 DNAJC19Q96DA6 116 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 DNAJC1Q96KC8 554 aaKnown RBP16.46■□□□□ 0.23
BRAT1-206ENST00000493232 KLHL1Q9NR64 748 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 TAS2R14Q9NYV8 317 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 VAV3Q9UKW4 847 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 A0A087WXM4 84 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 H7C0S8 307 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 OPLAHO14841 1288 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 NDUFS2O75306 463 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 CTNNB1P35222 781 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 DGUOKQ16854 277 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 CKAP2Q8WWK9 683 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 CORO1BQ9BR76 489 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 MFSD1Q9H3U5 465 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 CNGB3Q9NQW8 809 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 FBXO6Q9NRD1 293 aaPredicted RBP16.46■□□□□ 0.23
BRAT1-206ENST00000493232 BTBD7Q9P203 1132 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 ATP6V1HQ9UI12 483 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 PROCP04070 461 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 RPA3P35244 121 aaPredicted RBP16.46■□□□□ 0.23
BRAT1-206ENST00000493232 ATP6V0D1P61421 351 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 ZNF618Q5T7W0 954 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 C16orf46Q6P387 395 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 PIWIL4Q7Z3Z4 852 aaKnown RBP16.46■□□□□ 0.23
BRAT1-206ENST00000493232 KRT77Q7Z794 578 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 SEMA3CQ99985 751 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 MRPL57Q9BQC6 102 aaKnown RBP16.46■□□□□ 0.23
BRAT1-206ENST00000493232 KLHL25Q9H0H3 589 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 COL1A2P08123 1366 aa16.46■□□□□ 0.23
BRAT1-206ENST00000493232 ZACNQ401N2 412 aa16.46■□□□□ 0.22
BRAT1-206ENST00000493232 BRMS1LQ5PSV4 323 aa16.46■□□□□ 0.22
BRAT1-206ENST00000493232 TBCDQ9BTW9 1192 aa16.46■□□□□ 0.22
BRAT1-206ENST00000493232 ANGPT4Q9Y264 503 aa16.46■□□□□ 0.22
BRAT1-206ENST00000493232 CRATP43155 626 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 CSNK2BP67870 215 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 SMARCB1Q12824 385 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 BMT2Q1RMZ1 405 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 LNX1Q8TBB1 728 aaPredicted RBP16.45■□□□□ 0.22
BRAT1-206ENST00000493232 NEK6Q9HC98 313 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 MATKP42679 507 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 ABL2P42684 1182 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 RAB10P61026 200 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 NOMO3P69849 1222 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 PEX6Q13608 980 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 PSMD5Q16401 504 aa16.45■□□□□ 0.22
BRAT1-206ENST00000493232 RGL4Q8IZJ4 473 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms