RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 KANSL1Q7Z3B3 1105 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 SLFN11Q7Z7L1 901 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 DRC7Q8IY82 874 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 FAM181AQ8N9Y4 354 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 OR2AP1Q8NGE2 309 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 OR4C6Q8NH72 309 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 GRIN3AQ8TCU5 1115 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 HCAR2Q8TDS4 363 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 FAM172AQ8WUF8 416 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 BTN2A2Q8WVV5 523 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 HNRNPLLQ8WVV9 542 aaKnown RBP8.91□□□□□ -0.98
NUP50-217ENST00000491860 ARHGEF2Q92974 986 aaKnown RBP8.91□□□□□ -0.98
NUP50-217ENST00000491860 ARRDC3Q96B67 414 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 VCPIP1Q96JH7 1222 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 LENG8Q96PV6 779 aaPredicted RBP8.91□□□□□ -0.98
NUP50-217ENST00000491860 ERGIC2Q96RQ1 377 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 UBL7Q96S82 380 aaPredicted RBP8.91□□□□□ -0.98
NUP50-217ENST00000491860 EPAS1Q99814 870 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 CALN1Q9BXU9 219 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 SLC17A9Q9BYT1 436 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 NLRC4Q9NPP4 1024 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 FANCLQ9NW38 375 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 NLGN3Q9NZ94 848 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 IPO11Q9UI26 975 aaKnown RBP8.91□□□□□ -0.98
NUP50-217ENST00000491860 SIK3Q9Y2K2 1263 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 FADS3Q9Y5Q0 445 aa8.91□□□□□ -0.98
NUP50-217ENST00000491860 K7ERQ8 282 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 PLK4O00444 970 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 NEMP1O14524 444 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 WNT9AO14904 365 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 KDELR3O43731 214 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 ZNF821O75541 412 aaPredicted RBP8.9□□□□□ -0.98
NUP50-217ENST00000491860 LRIG2O94898 1065 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 IGSF6O95976 241 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 PLEKP08567 350 aaPredicted RBP8.9□□□□□ -0.98
NUP50-217ENST00000491860 DGKAP23743 735 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 NUMBP49757 651 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 ZNF135P52742 658 aaPredicted RBP8.9□□□□□ -0.98
NUP50-217ENST00000491860 ZNF143P52747 638 aaPredicted RBP8.9□□□□□ -0.98
NUP50-217ENST00000491860 COPB1P53618 953 aaKnown RBP8.9□□□□□ -0.98
NUP50-217ENST00000491860 YPEL5P62699 121 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 ARF5P84085 180 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 UBXN1Q04323 297 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 CYP4F3Q08477 520 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 C19orf57Q0VDD7 668 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 BNIP3Q12983 259 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 PTK2BQ14289 1009 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 C15orf59Q2T9L4 293 aaPredicted RBP8.9□□□□□ -0.98
NUP50-217ENST00000491860 PROX2Q3B8N5 592 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 PARP15Q460N3 678 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 C2CD6Q53TS8 623 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 PRAMEF14Q5SWL7 426 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 HES3Q5TGS1 186 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 DNAJC24Q6P3W2 148 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 LRRC69Q6ZNQ3 347 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 PTAR1Q7Z6K3 402 aaPredicted RBP8.9□□□□□ -0.98
NUP50-217ENST00000491860 NLRP14Q86W24 1093 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 PARGQ86W56 976 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 ZNF354CQ86Y25 554 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 RYBPQ8N488 228 aaPredicted RBP8.9□□□□□ -0.98
NUP50-217ENST00000491860 EMC1Q8N766 993 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 RTL3Q8N8U3 475 aaKnown RBP8.9□□□□□ -0.98
NUP50-217ENST00000491860 CHST14Q8NCH0 376 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 LSM14AQ8ND56 463 aaKnown RBP8.9□□□□□ -0.98
NUP50-217ENST00000491860 SLC20A1Q8WUM9 679 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 BAP1Q92560 729 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 GLMNQ92990 594 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 GRAMD1AQ96CP6 724 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 TBATAQ96M53 351 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 GDAP1L1Q96MZ0 367 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 AGPAT1Q99943 283 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 NCAPGQ9BPX3 1015 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 TNKS2Q9H2K2 1166 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 ZDHHC6Q9H6R6 413 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 SEPT11Q9NVA2 429 aaKnown RBP8.9□□□□□ -0.98
NUP50-217ENST00000491860 CLCA2Q9UQC9 943 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 MFHAS1Q9Y4C4 1052 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 SNX10Q9Y5X0 201 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 CSNK1G3Q9Y6M4 447 aa8.9□□□□□ -0.98
NUP50-217ENST00000491860 TDRD6O60522 2096 aaKnown RBP8.89□□□□□ -0.99
NUP50-217ENST00000491860 SPTY2D1-AS1A0A0U1RR47 76 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 C16orf96A6NNT2 1141 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 WASH4PA8MWX3 477 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 KRIT1O00522 736 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 SCAMP1O15126 338 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 RRP8O43159 456 aaKnown RBP8.89□□□□□ -0.99
NUP50-217ENST00000491860 PIAS2O75928 621 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 CKMT1AP12532 417 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 PRLRP16471 622 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 CHRNB2P17787 502 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 GLDCP23378 1020 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 EPHB2P29323 1055 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 RFC1P35251 1148 aaPredicted RBP8.89□□□□□ -0.99
NUP50-217ENST00000491860 ACTN2P35609 894 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 HDAC4P56524 1084 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 ELP6Q0PNE2 266 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 DNAJC3Q13217 504 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 MAPK8IP2Q13387 824 aaPredicted RBP8.89□□□□□ -0.99
NUP50-217ENST00000491860 RTP5Q14D33 572 aa8.89□□□□□ -0.99
NUP50-217ENST00000491860 MYLK3Q32MK0 819 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms