RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 BCLAF3A2AJT9 711 aaKnown RBP16.06■□□□□ 0.16
TRA2A-208ENST00000490942 ENC1O14682 589 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 SLC7A4O43246 635 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 LILRB5O75023 590 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 ACADMP11310 421 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 PAPD7Q5XG87 772 aaKnown RBP16.06■□□□□ 0.16
TRA2A-208ENST00000490942 AADACL2Q6P093 401 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 TSSK4Q6SA08 328 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 LEKR1Q6ZMV7 388 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 PGBD3Q8N328 593 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 TSEN2Q8NCE0 465 aaKnown RBP16.06■□□□□ 0.16
TRA2A-208ENST00000490942 SLC35B2Q8TB61 432 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 PPP1R16AQ96I34 528 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 ZNF641Q96N77 438 aaPredicted RBP16.06■□□□□ 0.16
TRA2A-208ENST00000490942 NUDCD1Q96RS6 583 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 TM6SF2Q9BZW4 377 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 POLR1EQ9GZS1 481 aaKnown RBP16.06■□□□□ 0.16
TRA2A-208ENST00000490942 TNKS2Q9H2K2 1166 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 HOMER3Q9NSC5 361 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 SAE1Q9UBE0 346 aaPredicted RBP16.06■□□□□ 0.16
TRA2A-208ENST00000490942 HCN4Q9Y3Q4 1203 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 ACTL7AQ9Y615 435 aa16.06■□□□□ 0.16
TRA2A-208ENST00000490942 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.05■□□□□ 0.16
TRA2A-208ENST00000490942 A0A1W2PQ67 120 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 CTAGE9A4FU28 777 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 CFAP69A5D8W1 941 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 MAP3K6O95382 1288 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 IL1BP01584 269 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 ATP1A1P05023 1023 aaKnown RBP16.05■□□□□ 0.16
TRA2A-208ENST00000490942 RBP3P10745 1247 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 SLC8A1P32418 973 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 P2RY2P41231 377 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 SUOXP51687 545 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 ETF1P62495 437 aaKnown RBP16.05■□□□□ 0.16
TRA2A-208ENST00000490942 AP1B1Q10567 949 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 TCF15Q12870 199 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 LLGL1Q15334 1064 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 SLC14A2Q15849 920 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 MAP7D1Q3KQU3 841 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 TEX44Q53QW1 395 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 SPDYCQ5MJ68 293 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 HEATR6Q6AI08 1181 aaKnown RBP16.05■□□□□ 0.16
TRA2A-208ENST00000490942 DRICH1Q6PGQ1 229 aaPredicted RBP16.05■□□□□ 0.16
TRA2A-208ENST00000490942 SRLQ86TD4 932 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 MMAAQ8IVH4 418 aaKnown RBP16.05■□□□□ 0.16
TRA2A-208ENST00000490942 PIP4K2CQ8TBX8 421 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 HTR3CQ8WXA8 447 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 NKD2Q969F2 451 aaPredicted RBP16.05■□□□□ 0.16
TRA2A-208ENST00000490942 SPACA7Q96KW9 195 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 OSBPL9Q96SU4 736 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 NAPGQ99747 312 aaPredicted RBP16.05■□□□□ 0.16
TRA2A-208ENST00000490942 HDAC8Q9BY41 377 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 PCED1AQ9H1Q7 454 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 RBM22Q9NW64 420 aaKnown RBP eCLIP16.05■□□□□ 0.16
TRA2A-208ENST00000490942 DKK3Q9UBP4 350 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 TRHDEQ9UKU6 1024 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 TPX2Q9ULW0 747 aaKnown RBP16.05■□□□□ 0.16
TRA2A-208ENST00000490942 ATP8A1Q9Y2Q0 1164 aa16.05■□□□□ 0.16
TRA2A-208ENST00000490942 CEP104O60308 925 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 SOCS5O75159 536 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 NEBLO76041 1014 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 FGGP02679 453 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 CTSLP07711 333 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 ITGB7P26010 798 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 FNTBP49356 437 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 TPMTP51580 245 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 EIF3EP60228 445 aaKnown RBP16.04■□□□□ 0.16
TRA2A-208ENST00000490942 KIAA1324Q6UXG2 1013 aaKnown RBP16.04■□□□□ 0.16
TRA2A-208ENST00000490942 SLC36A4Q6YBV0 504 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 NYAP1Q6ZVC0 841 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 ZC3H18Q86VM9 953 aaKnown RBP16.04■□□□□ 0.16
TRA2A-208ENST00000490942 RYBPQ8N488 228 aaPredicted RBP16.04■□□□□ 0.16
TRA2A-208ENST00000490942 CHST14Q8NCH0 376 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 PRSS33Q8NF86 280 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 ACTRT1Q8TDG2 376 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 GAB3Q8WWW8 586 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 VOPP1Q96AW1 172 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 TEKT5Q96M29 485 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 WDR24Q96S15 920 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 KDM4CQ9H3R0 1056 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 SEMA4AQ9H3S1 761 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 SGK2Q9HBY8 427 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 NCKAP1Q9Y2A7 1128 aa16.04■□□□□ 0.16
TRA2A-208ENST00000490942 TSPAN11A1L157 253 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 KCNK1O00180 336 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 KRIT1O00522 736 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 MUSKO15146 869 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 INSIG1O15503 277 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 BNIP3LO60238 219 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 LEFTY1O75610 366 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 JCHAINP01591 159 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 SERPINA4P29622 427 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 STIP1P31948 543 aaKnown RBP16.03■□□□□ 0.16
TRA2A-208ENST00000490942 DMWDQ09019 674 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 CCNG2Q16589 344 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 ZNF805Q5CZA5 627 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 ARSIQ5FYB1 569 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 ATXN7L2Q5T6C5 722 aaPredicted RBP16.03■□□□□ 0.16
TRA2A-208ENST00000490942 NCEH1Q6PIU2 408 aa16.03■□□□□ 0.16
TRA2A-208ENST00000490942 GDPD4Q6W3E5 623 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms