RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-204ENST00000490751 TMEM121BQ9BXQ6 578 aaPredicted RBP31.89■■■□□ 2.7
LDB1-204ENST00000490751 DHX35Q9H5Z1 703 aaKnown RBP31.89■■■□□ 2.7
LDB1-204ENST00000490751 MYO1AQ9UBC5 1043 aa31.89■■■□□ 2.7
LDB1-204ENST00000490751 ZFR2Q9UPR6 939 aaKnown RBP31.89■■■□□ 2.7
LDB1-204ENST00000490751 KRIT1O00522 736 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 YKT6O15498 198 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 MAGEC1O60732 1142 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 RNF8O76064 485 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 TMCC1O94876 653 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 ATXN1LP0C7T5 689 aaKnown RBP31.88■■■□□ 2.69
LDB1-204ENST00000490751 HTR7P34969 479 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 ARRB1P49407 418 aaPredicted RBP31.88■■■□□ 2.69
LDB1-204ENST00000490751 CA9Q16790 459 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 ZSCAN23Q3MJ62 389 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 PARP15Q460N3 678 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 HGSNATQ68CP4 663 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 SEL1L3Q68CR1 1132 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 OXR1Q8N573 874 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 TMEM145Q8NBT3 493 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 GATA6Q92908 595 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 LRIG1Q96JA1 1093 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 SNRNP25Q9BV90 132 aaKnown RBP31.88■■■□□ 2.69
LDB1-204ENST00000490751 ISCUQ9H1K1 167 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 ERVMER34-1Q9H9K5 563 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 FZD3Q9NPG1 666 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 TOR4AQ9NXH8 423 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 MSRB2Q9Y3D2 182 aa31.88■■■□□ 2.69
LDB1-204ENST00000490751 TRPM6Q9BX84 2022 aa31.87■■■□□ 2.69
LDB1-204ENST00000490751 ITGAVP06756 1048 aa31.87■■■□□ 2.69
LDB1-204ENST00000490751 PROS1P07225 676 aa31.87■■■□□ 2.69
LDB1-204ENST00000490751 MYBL1P10243 752 aa31.87■■■□□ 2.69
LDB1-204ENST00000490751 EPHA8P29322 1005 aaPredicted RBP31.87■■■□□ 2.69
LDB1-204ENST00000490751 SERINC3Q13530 473 aa31.87■■■□□ 2.69
LDB1-204ENST00000490751 ATXN7L2Q5T6C5 722 aaPredicted RBP31.87■■■□□ 2.69
LDB1-204ENST00000490751 ERMARDQ5T6L9 678 aa31.87■■■□□ 2.69
LDB1-204ENST00000490751 SAP25Q8TEE9 199 aa31.87■■■□□ 2.69
LDB1-204ENST00000490751 CASKIN2Q8WXE0 1202 aa31.87■■■□□ 2.69
LDB1-204ENST00000490751 FADS3Q9Y5Q0 445 aa31.87■■■□□ 2.69
LDB1-204ENST00000490751 FRYQ5TBA9 3013 aa31.87■■■□□ 2.69
LDB1-204ENST00000490751 EEF2KO00418 725 aaKnown RBP31.86■■■□□ 2.69
LDB1-204ENST00000490751 POP4O95707 220 aaKnown RBP31.86■■■□□ 2.69
LDB1-204ENST00000490751 HNRNPA2B1P22626 353 aaKnown RBP31.86■■■□□ 2.69
LDB1-204ENST00000490751 MIPP30301 263 aa31.86■■■□□ 2.69
LDB1-204ENST00000490751 MYLK3Q32MK0 819 aa31.86■■■□□ 2.69
LDB1-204ENST00000490751 TMEM259Q4ZIN3 620 aa31.86■■■□□ 2.69
LDB1-204ENST00000490751 NETO2Q8NC67 525 aa31.86■■■□□ 2.69
LDB1-204ENST00000490751 CPLX3Q8WVH0 158 aa31.86■■■□□ 2.69
LDB1-204ENST00000490751 SYN2Q92777 582 aaPredicted RBP31.86■■■□□ 2.69
LDB1-204ENST00000490751 VOPP1Q96AW1 172 aa31.86■■■□□ 2.69
LDB1-204ENST00000490751 KLHDC7BQ96G42 594 aa31.86■■■□□ 2.69
LDB1-204ENST00000490751 GDAP1L1Q96MZ0 367 aa31.86■■■□□ 2.69
LDB1-204ENST00000490751 MRPL47Q9HD33 250 aaKnown RBP31.86■■■□□ 2.69
LDB1-204ENST00000490751 IFNKQ9P0W0 207 aa31.86■■■□□ 2.69
LDB1-204ENST00000490751 COL5A1P20908 1838 aaPredicted RBP31.85■■■□□ 2.69
LDB1-204ENST00000490751 GOLGA8CPA6NN73 597 aa31.85■■■□□ 2.69
LDB1-204ENST00000490751 C16orf96A6NNT2 1141 aa31.85■■■□□ 2.69
LDB1-204ENST00000490751 EIF3CLB5ME19 914 aaKnown RBP31.85■■■□□ 2.69
LDB1-204ENST00000490751 TNFSF14O43557 240 aa31.85■■■□□ 2.69
LDB1-204ENST00000490751 PRPSAP2O60256 369 aa31.85■■■□□ 2.69
LDB1-204ENST00000490751 UGT2B4P06133 528 aa31.85■■■□□ 2.69
LDB1-204ENST00000490751 AKT2P31751 481 aa31.85■■■□□ 2.69
LDB1-204ENST00000490751 INO80DQ53TQ3 878 aaPredicted RBP31.85■■■□□ 2.69
LDB1-204ENST00000490751 ZNF805Q5CZA5 627 aa31.85■■■□□ 2.69
LDB1-204ENST00000490751 KIAA1161Q6NSJ0 714 aa31.85■■■□□ 2.69
LDB1-204ENST00000490751 KCTD15Q96SI1 283 aaPredicted RBP31.85■■■□□ 2.69
LDB1-204ENST00000490751 EIF3CQ99613 913 aaKnown RBP31.85■■■□□ 2.69
LDB1-204ENST00000490751 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP31.85■■■□□ 2.69
LDB1-204ENST00000490751 OSBPL1AQ9BXW6 950 aa31.85■■■□□ 2.69
LDB1-204ENST00000490751 DONSONQ9NYP3 566 aa31.85■■■□□ 2.69
LDB1-204ENST00000490751 BZW2Q9Y6E2 419 aaKnown RBP31.85■■■□□ 2.69
LDB1-204ENST00000490751 SPEGQ15772 3267 aa31.85■■■□□ 2.69
LDB1-204ENST00000490751 AP1G1O43747 822 aa31.84■■■□□ 2.69
LDB1-204ENST00000490751 LRCH4O75427 683 aa31.84■■■□□ 2.69
LDB1-204ENST00000490751 ABL2P42684 1182 aa31.84■■■□□ 2.69
LDB1-204ENST00000490751 RXRGP48443 463 aa31.84■■■□□ 2.69
LDB1-204ENST00000490751 RHOAP61586 193 aa31.84■■■□□ 2.69
LDB1-204ENST00000490751 RPS21P63220 83 aaKnown RBP31.84■■■□□ 2.69
LDB1-204ENST00000490751 ZBED6P86452 979 aa31.84■■■□□ 2.69
LDB1-204ENST00000490751 CYP4V2Q6ZWL3 525 aaPredicted RBP31.84■■■□□ 2.69
LDB1-204ENST00000490751 LRRC19Q9H756 370 aa31.84■■■□□ 2.69
LDB1-204ENST00000490751 FTSJ1Q9UET6 329 aa31.84■■■□□ 2.69
LDB1-204ENST00000490751 CAPN11Q9UMQ6 739 aa31.84■■■□□ 2.69
LDB1-204ENST00000490751 CACNA1BQ00975 2339 aa31.83■■■□□ 2.69
LDB1-204ENST00000490751 KMT2BQ9UMN6 2715 aaPredicted RBP31.83■■■□□ 2.69
LDB1-204ENST00000490751 FAM221BA6H8Z2 402 aa31.83■■■□□ 2.69
LDB1-204ENST00000490751 IGSF6O95976 241 aa31.83■■■□□ 2.69
LDB1-204ENST00000490751 SERPING1P05155 500 aa31.83■■■□□ 2.69
LDB1-204ENST00000490751 THEGLP0DJG4 465 aa31.83■■■□□ 2.69
LDB1-204ENST00000490751 BNIP3Q12983 259 aa31.83■■■□□ 2.69
LDB1-204ENST00000490751 MAPK8IP2Q13387 824 aaPredicted RBP31.83■■■□□ 2.69
LDB1-204ENST00000490751 VPS36Q86VN1 386 aa31.83■■■□□ 2.69
LDB1-204ENST00000490751 RAB7BQ96AH8 199 aa31.83■■■□□ 2.69
LDB1-204ENST00000490751 IQCDQ96DY2 449 aa31.83■■■□□ 2.69
LDB1-204ENST00000490751 CELF6Q96J87 481 aaKnown RBP31.83■■■□□ 2.69
LDB1-204ENST00000490751 FEM1CQ96JP0 617 aa31.83■■■□□ 2.69
LDB1-204ENST00000490751 KLHL32Q96NJ5 620 aa31.83■■■□□ 2.69
LDB1-204ENST00000490751 PTPRBP23467 1997 aa31.83■■■□□ 2.69
LDB1-204ENST00000490751 DAPK3O43293 454 aa31.82■■■□□ 2.68
LDB1-204ENST00000490751 DKK1O94907 266 aa31.82■■■□□ 2.68
LDB1-204ENST00000490751 NDST2P52849 883 aa31.82■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms